Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 USP9YP14-201ENST00000430663 563 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 MTATP6P17-201ENST00000431030 672 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 AC009237.7-201ENST00000447357 229 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC1.11□□□□□ -2.23
CDKN2DP55273 MTCO3P8-201ENST00000453691 755 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 HMGN1P13-201ENST00000505795 138 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 RNA5SP445-201ENST00000515889 115 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 RNU6-405P-201ENST00000516637 110 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 RNU6-902P-201ENST00000517212 91 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 IGHVII-53-1-201ENST00000519538 255 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC1.11□□□□□ -2.23
CDKN2DP55273 HMGB1P33-201ENST00000563485 527 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.11□□□□□ -2.23
CDKN2DP55273 AC010620.1-201ENST00000601088 1102 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 AP003465.2-201ENST00000602571 373 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 AP000942.3-201ENST00000603702 160 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 OR5AK4P-201ENST00000635912 903 ntBASIC1.11□□□□□ -2.23
CDKN2DP55273 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.11□□□□□ -2.23
CDKN2DP55273 RNU6-259P-201ENST00000383999 107 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 RNU6-1235P-201ENST00000384559 107 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC1.1□□□□□ -2.23
CDKN2DP55273 SNRPEP10-201ENST00000420249 274 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC027119.1-201ENST00000440877 241 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC1.1□□□□□ -2.23
CDKN2DP55273 AC016717.1-201ENST00000448918 286 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC098826.2-201ENST00000452011 651 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 RNU6-498P-201ENST00000459468 107 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC1.1□□□□□ -2.23
CDKN2DP55273 RNA5SP481-201ENST00000516814 122 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
CDKN2DP55273 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC1.1□□□□□ -2.23
CDKN2DP55273 AC015688.6-201ENST00000577737 104 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 RNU6-89P-201ENST00000606519 100 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC004492.1-201ENST00000607036 742 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC104458.1-201ENST00000608243 463 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 MIR8076-201ENST00000611401 83 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 Z99129.1-201ENST00000612510 255 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AL359880.1-201ENST00000621879 266 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 AC124864.2-201ENST00000624736 186 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 MIR6863-201ENST00000636112 90 ntBASIC1.1□□□□□ -2.23
CDKN2DP55273 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.1□□□□□ -2.23
CDKN2DP55273 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC1.09□□□□□ -2.23
CDKN2DP55273 SNORA33-201ENST00000363664 130 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 SNORD113-7-201ENST00000363762 77 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 Y_RNA.231-201ENST00000364358 102 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 RNU6-968P-201ENST00000384076 107 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 SNORD116-1-201ENST00000384335 95 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 MTCO3P40-201ENST00000392516 676 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AC004965.1-201ENST00000413033 213 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKN2DP55273 RPS27P16-201ENST00000425758 201 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 MRPS10P2-201ENST00000431226 381 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 NFU1P2-201ENST00000448700 469 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKN2DP55273 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 MTCO1P29-201ENST00000496868 288 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKN2DP55273 TRAPPC2P7-201ENST00000509650 231 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 Y_RNA.693-201ENST00000516641 110 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 MIR4742-201ENST00000581069 85 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 MIR5006-201ENST00000583027 110 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 MIR4753-201ENST00000585119 83 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AP000907.4-201ENST00000604143 237 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AL158209.2-201ENST00000619266 216 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 AL121890.5-201ENST00000620848 304 ntBASIC1.09□□□□□ -2.23
CDKN2DP55273 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC1.09□□□□□ -2.23
CDKN2DP55273 AC100821.1-201ENST00000523153 2479 ntBASIC1.09□□□□□ -2.24
CDKN2DP55273 ICE2P2-201ENST00000483823 2787 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 RNU6-1085P-201ENST00000363576 107 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 RNU6-214P-201ENST00000384130 107 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 MIR487A-201ENST00000385009 80 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 MIR586-201ENST00000385035 97 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 RNU6-482P-201ENST00000391068 107 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 PLCL2-AS1-201ENST00000414844 311 ntTSL 2 BASIC1.08□□□□□ -2.24
CDKN2DP55273 EBAG9P1-201ENST00000418955 543 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC1.08□□□□□ -2.24
CDKN2DP55273 MTCO3P29-201ENST00000432119 779 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 FTH1P12-201ENST00000432137 551 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 HMGN2P34-201ENST00000437647 269 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC1.08□□□□□ -2.24
CDKN2DP55273 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC1.08□□□□□ -2.24
CDKN2DP55273 RNU6-948P-201ENST00000516374 107 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 RNU6-1332P-201ENST00000516666 104 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.08□□□□□ -2.24
CDKN2DP55273 MDM2-232ENST00000544561 213 ntTSL 5 BASIC1.08□□□□□ -2.24
CDKN2DP55273 AC005668.1-201ENST00000571142 476 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC1.08□□□□□ -2.24
CDKN2DP55273 AL133215.3-201ENST00000609801 448 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 AC073534.2-201ENST00000620377 381 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 SCARNA4-201ENST00000629045 128 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 AC068137.3-201ENST00000639191 341 ntBASIC1.08□□□□□ -2.24
CDKN2DP55273 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.07□□□□□ -2.24
CDKN2DP55273 snoU2-30.2-201ENST00000362805 70 ntBASIC1.07□□□□□ -2.24
CDKN2DP55273 SNORD50.1-201ENST00000362987 71 ntBASIC1.07□□□□□ -2.24
CDKN2DP55273 RNU6-254P-201ENST00000363377 107 ntBASIC1.07□□□□□ -2.24
CDKN2DP55273 RNU6-534P-201ENST00000364877 106 ntBASIC1.07□□□□□ -2.24
CDKN2DP55273 SNORA4.2-201ENST00000365313 147 ntBASIC1.07□□□□□ -2.24
CDKN2DP55273 RNU6-1068P-201ENST00000410958 103 ntBASIC1.07□□□□□ -2.24
CDKN2DP55273 AC079354.2-201ENST00000453523 154 ntBASIC1.07□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 310 ms