Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC025465.4-201ENST00000513422 638 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU1-142P-201ENST00000516682 145 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 MTND4LP26-201ENST00000518144 282 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 DEFB131C-201ENST00000528817 165 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC109810.1-201ENST00000534066 224 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC008507.2-201ENST00000588402 1176 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC100812.1-201ENST00000607622 580 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AC006001.4-201ENST00000622243 395 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 AL356596.1-201ENST00000624230 379 ntBASIC0□□□□□ -2.41
TRAV13-1A0A0B4J241 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0□□□□□ -2.41
TRAV13-1A0A0B4J241 AL589743.1-201ENST00000551932 2712 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-37P-201ENST00000362692 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-11P-201ENST00000364234 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-1-201ENST00000383898 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-42P-201ENST00000384165 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-36P-201ENST00000384172 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-4P-201ENST00000384205 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-5P-201ENST00000384238 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-975P-201ENST00000384296 105 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-3P-201ENST00000384314 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-2-201ENST00000384627 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-9-201ENST00000384776 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-33P-201ENST00000384793 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 MRPL42P3-201ENST00000401492 326 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR1253-201ENST00000408273 105 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC114491.1-201ENST00000416095 246 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 C5orf58-201ENST00000421269 406 ntAPPRIS ALT2 TSL 2 BASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AL353777.1-201ENST00000425552 326 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AL162725.1-201ENST00000435405 301 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 MTND1P12-201ENST00000455231 147 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 snoU13.25-201ENST00000458945 104 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RBBP4P6-201ENST00000508098 202 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC023827.1-201ENST00000569247 97 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AL391840.1-201ENST00000571144 367 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-6P-201ENST00000606623 107 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC064807.4-201ENST00000607201 407 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AC004832.4-201ENST00000608952 331 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AL096861.1-201ENST00000610899 123 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 AL157786.1-207ENST00000627771 695 ntBASIC-0.01□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-793P-201ENST00000384233 104 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-45P-201ENST00000384471 107 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR499A-201ENST00000384903 122 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR549A-201ENST00000385268 96 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-177P-201ENST00000411257 104 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MTCYBP10-201ENST00000424905 650 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC104332.1-201ENST00000440471 797 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 RNA5SP220-201ENST00000516298 104 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC004223.2-201ENST00000590309 544 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL162424.1-201ENST00000602325 221 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 Z99497.2-201ENST00000603634 310 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 LARP7P1-201ENST00000605576 316 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL136317.1-201ENST00000612653 226 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL512427.1-201ENST00000618593 349 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AC006386.1-201ENST00000619436 415 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR6734-201ENST00000621166 68 ntBASIC-0.02□□□□□ -2.41
TRAV13-1A0A0B4J241 AL589826.1-201ENST00000340697 249 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 MIR103A1-201ENST00000362165 78 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-433P-201ENST00000363216 104 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 Y_RNA.330-201ENST00000365230 109 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU4-45P-201ENST00000365469 141 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-413P-201ENST00000384115 107 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 RNA5SP219-201ENST00000390940 113 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 MTCO1P19-201ENST00000443487 500 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AC007327.1-201ENST00000447461 264 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 LINC01399-202ENST00000458450 244 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 OR9P1P-201ENST00000496431 281 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 RNU6-201P-201ENST00000517100 61 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AC022868.1-201ENST00000517767 391 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AL359075.3-201ENST00000613288 217 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AL136221.1-201ENST00000621449 509 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AL359697.1-201ENST00000624879 587 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AC027514.1-201ENST00000588561 1603 ntBASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC-0.03□□□□□ -2.41
TRAV13-1A0A0B4J241 AC099786.3-201ENST00000565735 1410 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 AP000568.1-201ENST00000282964 442 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 SNORD44.1-201ENST00000363202 61 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 RNU6-25P-201ENST00000383873 107 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 RNU6-48P-201ENST00000384161 107 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 RNU6-15P-201ENST00000384534 107 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 RNU6-29P-201ENST00000384637 107 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 RNU1-139P-201ENST00000391307 165 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 RNU6ATAC33P-201ENST00000408647 126 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 CDK8P2-201ENST00000415020 547 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 AC090960.1-201ENST00000421072 306 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 AL445305.1-201ENST00000432577 575 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 SNAP23P1-201ENST00000433229 246 ntBASIC-0.04□□□□□ -2.42
TRAV13-1A0A0B4J241 AL596276.1-201ENST00000434465 418 ntBASIC-0.04□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 196.5 ms