Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 B3GNTL1P2-201ENST00000603673 288 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 AC064872.1-201ENST00000604823 1072 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 MIR6857-201ENST00000613267 93 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 MIR338-201ENST00000636369 67 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 BX322639.1-202ENST00000423987 2213 ntBASIC0.88□□□□□ -2.27
LRRC39Q96DD0 SNORD114-2-201ENST00000363953 78 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 RNU6-169P-201ENST00000365336 107 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 USP9YP28-201ENST00000435142 589 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 USP9YP12-201ENST00000450481 570 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 UBE2V1P12-201ENST00000503954 474 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.87□□□□□ -2.27
LRRC39Q96DD0 RNU6-351P-201ENST00000516097 100 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 RNU6-410P-201ENST00000517006 107 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AP000755.2-201ENST00000526777 571 ntTSL 5 BASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AC016256.1-201ENST00000547971 354 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AC008088.1-201ENST00000580993 280 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 MIR7844-201ENST00000616161 122 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AL133216.2-202ENST00000634512 349 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 AL450472.1-202ENST00000637286 180 ntBASIC0.87□□□□□ -2.27
LRRC39Q96DD0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNU5E-5P-201ENST00000365379 116 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNU6-418P-201ENST00000384035 107 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNU4-46P-201ENST00000410818 138 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC098592.1-201ENST00000419352 333 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 MTCYBP1-201ENST00000454315 1119 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC39Q96DD0 MTCO3P7-201ENST00000510008 774 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNU6-1178P-201ENST00000516674 107 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNA5SP102-201ENST00000516865 106 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNU6-165P-201ENST00000517170 99 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC109446.2-201ENST00000567872 497 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC0.86□□□□□ -2.27
LRRC39Q96DD0 FAM71BP1-201ENST00000604431 523 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AP000240.1-201ENST00000609910 452 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC009159.2-201ENST00000617603 606 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC011155.2-201ENST00000623202 216 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 AC022418.1-201ENST00000624118 445 ntBASIC0.86□□□□□ -2.27
LRRC39Q96DD0 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC0.86□□□□□ -2.27
LRRC39Q96DD0 RNU6-1080P-201ENST00000383982 107 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 RNU6-1235P-201ENST00000384559 107 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 MIR620-201ENST00000385232 95 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 SNORD12-201ENST00000391002 90 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 MIR208B-201ENST00000401172 77 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 MIR1283-1-201ENST00000408494 87 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC012306.1-201ENST00000423267 114 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 RNU6-498P-201ENST00000459468 107 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC079382.1-201ENST00000493346 557 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 TRBVA-201ENST00000498804 316 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 HMGN1P12-201ENST00000499125 195 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 RNU6-948P-201ENST00000516374 107 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 IGHVII-53-1-201ENST00000519538 255 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC087276.4-201ENST00000530042 444 ntTSL 3 BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 MIR4653-201ENST00000585107 83 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 MIR4753-201ENST00000585119 83 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC005771.1-201ENST00000585581 349 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC013244.2-201ENST00000603396 103 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AP001836.1-201ENST00000604675 523 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AC091304.9-201ENST00000612091 226 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 AP000720.1-201ENST00000625091 483 ntBASIC0.85□□□□□ -2.27
LRRC39Q96DD0 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC0.85□□□□□ -2.27
LRRC39Q96DD0 SNORD114-27-201ENST00000363766 70 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 RNU2-64P-201ENST00000411315 191 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 PIGFP2-201ENST00000421400 651 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 MTCO2P23-201ENST00000425216 680 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AL135908.1-201ENST00000431394 446 ntTSL 3 BASIC0.84□□□□□ -2.27
LRRC39Q96DD0 C1DP4-201ENST00000455429 424 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AC091435.1-201ENST00000505442 584 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 SNORA31.4-201ENST00000516049 129 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 Vault.3-201ENST00000516676 95 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AC090572.1-201ENST00000519251 160 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 SUMO2P16-201ENST00000519475 264 ntBASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC0.84□□□□□ -2.27
LRRC39Q96DD0 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC0.84□□□□□ -2.27
LRRC39Q96DD0 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
LRRC39Q96DD0 RNU6-545P-201ENST00000362681 104 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 snoU2-30.2-201ENST00000362805 70 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 RNU6-434P-201ENST00000384376 107 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 Y_RNA.504-201ENST00000384481 104 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 MIR454-201ENST00000390180 115 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AL008987.1-201ENST00000415528 237 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AC106883.1-201ENST00000418805 562 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AL596276.1-201ENST00000434465 418 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AC073614.1-201ENST00000438690 650 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 RNU7-182P-201ENST00000459009 62 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 GMFBP1-201ENST00000467831 427 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.83□□□□□ -2.28
LRRC39Q96DD0 AK3P2-201ENST00000507976 429 ntBASIC0.83□□□□□ -2.28
LRRC39Q96DD0 PSMC1P5-201ENST00000512850 177 ntBASIC0.83□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 230.1 ms