Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC007395.1-201ENST00000451333 677 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 SNRPFP3-201ENST00000457792 225 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC092991.1-201ENST00000477176 376 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 SRP72-202ENST00000504757 745 ntTSL 2 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC091435.1-201ENST00000505442 584 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 Y_RNA.689-201ENST00000516589 107 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC110760.3-201ENST00000598794 467 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AP002802.2-201ENST00000605877 235 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 AC131159.1-201ENST00000621854 213 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 RMST_7.1-201ENST00000621935 268 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 FRG1KP-201ENST00000623592 341 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORD3E-202ENST00000627253 216 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 MIR5087-201ENST00000635826 76 ntBASIC0.26□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU5B-4P-201ENST00000363508 111 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-946P-201ENST00000383878 107 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-142P-201ENST00000384019 107 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6ATAC15P-201ENST00000408279 121 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU4-22P-201ENST00000411058 166 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 AC098934.3-201ENST00000430450 190 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RPS29P1-201ENST00000465274 159 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RPS26P48-201ENST00000491713 339 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 AC105758.1-201ENST00000506038 399 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-856P-201ENST00000516959 98 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-334P-201ENST00000517072 102 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 MIR5695-201ENST00000579717 85 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 AC136443.5-201ENST00000603741 370 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 AL031281.1-201ENST00000604049 488 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORD98-201ENST00000636377 67 ntBASIC0.25□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-78P-201ENST00000362897 107 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 MTCYBP2-201ENST00000407745 171 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 ELOCP17-201ENST00000414751 326 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AC092628.1-201ENST00000436250 252 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 GAPDHP17-201ENST00000449858 1001 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AC113410.1-201ENST00000505029 247 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU4-57P-201ENST00000515980 135 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AC109446.1-201ENST00000566172 220 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AC012507.3-201ENST00000603556 477 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AL513534.2-201ENST00000603836 250 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 CTHRC1P1-201ENST00000605383 469 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AL354696.1-201ENST00000614652 497 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 AC006927.2-201ENST00000639256 389 ntBASIC0.24□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORA72.2-201ENST00000365028 127 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU5E-6P-201ENST00000365574 115 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC092423.1-201ENST00000430165 186 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU7-14P-201ENST00000459331 62 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC002350.1-201ENST00000490759 375 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 HMGN1P12-201ENST00000499125 195 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 FABP5P5-201ENST00000515537 406 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-922P-201ENST00000516753 99 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AP001893.2-201ENST00000526949 202 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC090888.2-201ENST00000559765 1144 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 MTATP6P3-201ENST00000581686 676 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 MIR548AC-201ENST00000585049 88 ntBASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC0.23□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-511P-201ENST00000363496 107 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 U3.8-201ENST00000363675 217 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-621P-201ENST00000364752 109 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORD114-22-201ENST00000365423 72 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 SNORA40.2-201ENST00000390847 128 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AL031577.2-201ENST00000404133 280 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC060773.1-201ENST00000421698 310 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AL359081.1-201ENST00000432083 615 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC073614.1-201ENST00000438690 650 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AL162395.1-201ENST00000457882 422 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC011406.1-201ENST00000512440 370 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-1098P-201ENST00000516772 96 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC021231.3-201ENST00000558497 370 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 KC877982.1-201ENST00000602313 470 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 GHRLOS.1-201ENST00000610995 70 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AC026585.1-201ENST00000619582 524 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 AL359757.2-201ENST00000624309 274 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 MIR6516-201ENST00000630554 81 ntBASIC0.22□□□□□ -2.37
TRAV13-1A0A0B4J241 RNU6-1235P-201ENST00000384559 107 ntBASIC0.21□□□□□ -2.38
TRAV13-1A0A0B4J241 RNU6-1179P-201ENST00000384667 107 ntBASIC0.21□□□□□ -2.38
TRAV13-1A0A0B4J241 RNU6-1237P-201ENST00000384777 107 ntBASIC0.21□□□□□ -2.38
TRAV13-1A0A0B4J241 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC0.21□□□□□ -2.38
TRAV13-1A0A0B4J241 UBE2D3P3-201ENST00000426992 425 ntBASIC0.21□□□□□ -2.38
TRAV13-1A0A0B4J241 MTCO2P12-201ENST00000427426 682 ntBASIC0.21□□□□□ -2.38
Retrieved 100 of 98,524 protein–RNA pairs in 172.1 ms