Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC2.65□□□□□ -1.98
LRRC53A6NM62 MTND4P27-201ENST00000450813 1354 ntBASIC2.65□□□□□ -1.98
LRRC53A6NM62 RNU6-1317P-201ENST00000364582 104 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 RNU6-1013P-201ENST00000384180 107 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 RNU6-220P-201ENST00000390919 107 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 RNU6-325P-201ENST00000411132 105 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AL030996.1-201ENST00000411430 235 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 EIF4EP4-201ENST00000424916 578 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 AL445687.1-201ENST00000439946 251 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 AC124916.1-201ENST00000444020 547 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AL031659.1-201ENST00000447075 539 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 PPP1R2P5-201ENST00000457256 603 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 RNA5SP320-201ENST00000516263 124 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 RNU6-566P-201ENST00000516790 107 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 GTF3AP2-201ENST00000557014 266 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 AC073410.2-201ENST00000603240 332 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 AL356280.1-201ENST00000603614 379 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 uc_338.15-201ENST00000615470 191 ntBASIC2.65□□□□□ -1.99
LRRC53A6NM62 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
LRRC53A6NM62 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.65□□□□□ -1.99
LRRC53A6NM62 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC069528.2-201ENST00000624849 1991 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 OR56A5-201ENST00000340110 738 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 MIR21-201ENST00000362134 72 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RNU6-845P-201ENST00000362578 103 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RNU6-212P-201ENST00000362642 104 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RNU6-43P-201ENST00000384302 107 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RNU1-57P-201ENST00000384491 166 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 MIR186-201ENST00000384988 86 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 MIR27B-201ENST00000385129 97 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC008267.5-201ENST00000424928 265 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.64□□□□□ -1.99
LRRC53A6NM62 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC130509.1-201ENST00000464158 433 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 SNRPGP7-201ENST00000469016 106 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RN7SKP24-201ENST00000515888 284 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 SNORA31.15-201ENST00000516771 132 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RNU7-30P-201ENST00000516835 62 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 RNU6-612P-201ENST00000516909 102 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC109329.1-201ENST00000518744 317 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC118273.2-201ENST00000532092 465 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC105245.1-201ENST00000581934 244 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.64□□□□□ -1.99
LRRC53A6NM62 AL159153.1-201ENST00000619688 317 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 AC007792.1-201ENST00000623023 402 ntBASIC2.64□□□□□ -1.99
LRRC53A6NM62 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
LRRC53A6NM62 RNU1-72P-201ENST00000362976 153 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 Y_RNA.88-201ENST00000363029 99 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 Y_RNA.151-201ENST00000363566 112 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 U3.13-201ENST00000364804 214 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 SNORD32A-201ENST00000364805 84 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 RNU1-51P-201ENST00000365345 176 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 SNORA70.4-201ENST00000365509 134 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 RNU6-1222P-201ENST00000384615 107 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 SNORA41-201ENST00000384675 132 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 U6atac.2-201ENST00000408644 118 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 AL645568.3-201ENST00000433683 316 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 USP9YP8-201ENST00000441913 500 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 RPS3AP12-201ENST00000443616 753 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC073901.1-201ENST00000462471 408 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC140059.1-201ENST00000489238 361 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 HMGN1P12-201ENST00000499125 195 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC046134.1-201ENST00000514454 666 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 Y_RNA.682-201ENST00000516457 100 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 RNA5SP454-201ENST00000517231 127 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AP005639.2-201ENST00000527592 928 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 MIR3616-201ENST00000584070 92 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AP001836.1-201ENST00000604675 523 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC069294.1-201ENST00000608397 350 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC022306.2-201ENST00000617563 647 ntBASIC2.63□□□□□ -1.99
LRRC53A6NM62 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.63□□□□□ -1.99
LRRC53A6NM62 AC002543.1-201ENST00000299783 1954 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
LRRC53A6NM62 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 RNA5SP387-201ENST00000364226 106 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 Y_RNA.333-201ENST00000365274 102 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 MIR518C-201ENST00000384822 101 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 MIR491-201ENST00000384877 84 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
LRRC53A6NM62 PDCL2P1-201ENST00000419302 352 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.62□□□□□ -1.99
LRRC53A6NM62 MTND3P9-201ENST00000429526 346 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC098614.3-201ENST00000438957 440 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AC025750.2-201ENST00000442609 450 ntBASIC2.62□□□□□ -1.99
LRRC53A6NM62 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 164.4 ms