Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.38□□□□□ -1.87
PNKPQ96T60 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.38□□□□□ -1.87
PNKPQ96T60 AC008269.2-201ENST00000561915 1105 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.38□□□□□ -1.87
PNKPQ96T60 HMGB1P24-202ENST00000615653 685 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 AL132822.1-201ENST00000617063 513 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
PNKPQ96T60 U2.21-201ENST00000637295 81 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.38□□□□□ -1.87
PNKPQ96T60 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.38□□□□□ -1.87
PNKPQ96T60 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
PNKPQ96T60 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.38□□□□□ -1.87
PNKPQ96T60 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.38□□□□□ -1.87
PNKPQ96T60 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 RNU6-778P-201ENST00000363269 103 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 RNY3P11-201ENST00000364153 102 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 RNU6-450P-201ENST00000364654 107 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 RNU6-196P-201ENST00000384315 107 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 MIR181B1-201ENST00000385240 110 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 AL591034.2-201ENST00000402839 359 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 RNU6-1156P-201ENST00000410365 100 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 RN7SKP123-201ENST00000410732 291 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 HMGB3P2-201ENST00000411913 584 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 AC096644.2-201ENST00000429278 159 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 CHEK2P4-201ENST00000450340 246 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 HMGN2P7-201ENST00000456186 273 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 RPL27AP5-201ENST00000469428 449 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.37□□□□□ -1.87
PNKPQ96T60 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC3.37□□□□□ -1.87
PNKPQ96T60 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.37□□□□□ -1.87
PNKPQ96T60 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.37□□□□□ -1.87
PNKPQ96T60 U4.7-201ENST00000638126 106 ntBASIC3.37□□□□□ -1.87
PNKPQ96T60 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
PNKPQ96T60 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
PNKPQ96T60 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.37□□□□□ -1.87
PNKPQ96T60 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.36□□□□□ -1.87
PNKPQ96T60 ZNF72P-201ENST00000425869 1908 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
PNKPQ96T60 ZBTB8OSP1-201ENST00000342688 498 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PNKPQ96T60 RNU6-78P-201ENST00000362897 107 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 Y_RNA.153-201ENST00000363615 91 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RNU6-884P-201ENST00000363889 107 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RNU6-336P-201ENST00000364891 107 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 SNORA51.4-201ENST00000364993 124 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RNU6-898P-201ENST00000365627 104 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 Y_RNA.389-201ENST00000383924 113 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 Y_RNA.455-201ENST00000384230 98 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PNKPQ96T60 UBA52P6-201ENST00000399822 382 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.36□□□□□ -1.87
PNKPQ96T60 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.36□□□□□ -1.87
PNKPQ96T60 CEP57L1P1-201ENST00000430943 1201 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 SNRPEP4-201ENST00000435815 279 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 IPO7P1-201ENST00000442031 636 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.36□□□□□ -1.87
PNKPQ96T60 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.36□□□□□ -1.87
PNKPQ96T60 HMGN2P16-201ENST00000456802 261 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 S100A11P2-201ENST00000467589 312 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RPS4XP13-201ENST00000483219 789 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RNA5SP341-201ENST00000516261 117 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RNU6-928P-201ENST00000516876 104 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 RNU6-612P-201ENST00000516909 102 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 GNAI2P1-201ENST00000541815 315 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 AC113195.1-201ENST00000579952 141 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 MIR4506-201ENST00000584693 77 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 AC005046.1-201ENST00000608515 625 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 MIR8076-201ENST00000611401 83 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 AL606534.2-204ENST00000635008 178 ntBASIC3.36□□□□□ -1.87
PNKPQ96T60 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
PNKPQ96T60 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
PNKPQ96T60 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.36□□□□□ -1.87
PNKPQ96T60 AL672296.1-201ENST00000427780 2158 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.35□□□□□ -1.87
PNKPQ96T60 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
PNKPQ96T60 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
PNKPQ96T60 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 RNU1-73P-201ENST00000383971 164 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 Y_RNA.577-201ENST00000384794 101 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AL138885.1-201ENST00000405921 675 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.35□□□□□ -1.87
PNKPQ96T60 HMGB1P12-201ENST00000438594 598 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC098831.1-201ENST00000440661 216 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.35□□□□□ -1.87
PNKPQ96T60 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.35□□□□□ -1.87
PNKPQ96T60 RPL21P104-201ENST00000464143 478 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AP004217.1-201ENST00000480579 346 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC006445.1-201ENST00000491925 405 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 RNA5SP76-201ENST00000516277 87 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.35□□□□□ -1.87
PNKPQ96T60 HSBP1P1-201ENST00000555205 166 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 LINC00933-203ENST00000559812 219 ntBASIC3.35□□□□□ -1.87
PNKPQ96T60 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 262.7 ms