Protein–RNA interactions for Protein: A6NM62

LRRC53, Leucine-rich repeat-containing protein 53, humanhuman

Predictions only

Length 1,247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC53A6NM62 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.72□□□□□ -1.97
LRRC53A6NM62 DUXAP9-208ENST00000622815 614 ntBASIC2.72□□□□□ -1.97
LRRC53A6NM62 AC010297.1-201ENST00000623948 149 ntBASIC2.72□□□□□ -1.97
LRRC53A6NM62 AC099654.14-201ENST00000638599 341 ntBASIC2.72□□□□□ -1.97
LRRC53A6NM62 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
LRRC53A6NM62 AC080128.1-201ENST00000474389 1917 ntBASIC2.72□□□□□ -1.97
LRRC53A6NM62 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.71□□□□□ -1.97
LRRC53A6NM62 RNU6-461P-201ENST00000364195 107 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LRRC53A6NM62 RNU6-214P-201ENST00000384130 107 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 MIR218-1-201ENST00000384999 110 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 RPS29P13-201ENST00000402041 169 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC138623.1-201ENST00000418060 216 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC097463.2-201ENST00000421074 142 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC243964.1-201ENST00000441814 261 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 MTCO2P3-201ENST00000442543 421 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.71□□□□□ -1.98
LRRC53A6NM62 TRBVA-201ENST00000498804 316 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 RNU6-864P-201ENST00000516256 108 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 RNU6-273P-201ENST00000516937 96 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC010186.2-204ENST00000537668 439 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC079598.5-201ENST00000547460 117 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC074050.1-201ENST00000563247 211 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 MIR3199-1-201ENST00000582434 88 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AC011712.1-201ENST00000588959 234 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 AL138726.1-201ENST00000614873 333 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 Z75746.1-201ENST00000440243 2080 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC2.71□□□□□ -1.98
LRRC53A6NM62 MTND5P30-201ENST00000452896 1731 ntBASIC2.71□□□□□ -1.98
LRRC53A6NM62 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC010329.5-201ENST00000623497 2174 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC53A6NM62 RNU6-859P-201ENST00000362728 107 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 VTRNA1-1-201ENST00000363120 99 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 U8.8-201ENST00000365399 135 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 RNU6-692P-201ENST00000384496 107 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC107083.1-201ENST00000439643 279 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 RPL32P28-201ENST00000443577 397 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 RPL7P12-201ENST00000446719 750 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 RPL30P12-201ENST00000474666 353 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC096576.1-201ENST00000489014 359 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AP000889.2-201ENST00000532684 490 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC026371.1-201ENST00000551867 419 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC100830.2-201ENST00000581636 240 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC009314.1-201ENST00000603871 304 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC096772.1-201ENST00000609146 564 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 AC241585.2-209ENST00000638217 143 ntBASIC2.7□□□□□ -1.98
LRRC53A6NM62 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LRRC53A6NM62 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.7□□□□□ -1.98
LRRC53A6NM62 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.69□□□□□ -1.98
LRRC53A6NM62 Y_RNA.72-201ENST00000362894 103 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 SNORD114-19-201ENST00000363072 75 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 Y_RNA.212-201ENST00000364177 102 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNU1-109P-201ENST00000383960 147 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNU6-128P-201ENST00000383976 107 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 MIR544A-201ENST00000384855 91 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 SNORA48.2-201ENST00000390926 124 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AL139095.1-201ENST00000404326 391 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNA5SP390-201ENST00000410191 113 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNA5SP181-201ENST00000410246 98 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 AL590632.1-201ENST00000424289 371 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC006946.1-201ENST00000429106 328 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RPL30P4-201ENST00000429309 333 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 MICF-203ENST00000432679 129 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 IFNA20P-201ENST00000436840 528 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AMD1P1-201ENST00000457220 922 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 SNORD109B-201ENST00000458961 67 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 SNORD109A-201ENST00000459128 67 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNU6-1037P-201ENST00000459571 107 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNU6-329P-201ENST00000459618 107 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RPL22P13-201ENST00000493291 347 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC097462.2-201ENST00000504623 481 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC096725.1-201ENST00000514266 313 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 SMURF2P1-201ENST00000514992 481 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RNU6-1088P-201ENST00000516850 104 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 RN7SKP40-201ENST00000517211 242 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.69□□□□□ -1.98
LRRC53A6NM62 TRAV32-201ENST00000553993 340 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 SCOCP1-201ENST00000554676 349 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC026464.5-201ENST00000562497 722 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 BNIP3P16-201ENST00000589779 534 ntBASIC2.69□□□□□ -1.98
LRRC53A6NM62 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms