Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
TMEM88BA6NKF7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 OTUD4P1-201ENST00000237841 3067 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 Y_RNA.26-201ENST00000362539 101 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 SNORD81.1-201ENST00000363064 77 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 MIR147B-201ENST00000390185 80 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 RNA5SP38-201ENST00000410750 119 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 RNU2-38P-201ENST00000410856 79 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 RNU2-25P-201ENST00000411041 191 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 AC138623.1-201ENST00000418060 216 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 AL358075.3-201ENST00000426289 226 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 EIF1P2-201ENST00000428233 350 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 SSXP4-201ENST00000451349 245 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 U8.22-201ENST00000459141 133 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 HMGB3P16-201ENST00000508037 287 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 RNU6-1023P-201ENST00000516137 106 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 RNU7-143P-201ENST00000516781 65 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 MIR3136-201ENST00000583498 78 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 YPEL5P2-201ENST00000605553 359 ntBASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC4.59□□□□□ -1.67
TMEM88BA6NKF7 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
TMEM88BA6NKF7 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC4.59□□□□□ -1.68
TMEM88BA6NKF7 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.59□□□□□ -1.68
TMEM88BA6NKF7 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 SNORD115-46-201ENST00000390982 71 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 MIR1251-201ENST00000408552 70 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC005326.1-201ENST00000429197 123 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 SNORD105B-201ENST00000458770 79 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 RPL21P10-201ENST00000463521 490 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC012493.2-201ENST00000595083 291 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC012531.5-201ENST00000611375 151 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 SDR42E1P4-201ENST00000620894 481 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 UBE3AP2-201ENST00000429033 2259 ntBASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
TMEM88BA6NKF7 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 Y_RNA.518-201ENST00000384552 113 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 Y_RNA.562-201ENST00000384695 113 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 MIR320B2-201ENST00000408479 138 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 RN7SKP58-201ENST00000411010 305 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 AC012306.1-201ENST00000423267 114 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 AC139712.2-201ENST00000424302 339 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 RPS26P2-201ENST00000440331 348 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 AC096638.1-201ENST00000444678 216 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 AC008155.2-201ENST00000464337 397 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 SNRPGP3-201ENST00000469405 227 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 EIF4BP1-201ENST00000554881 351 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 GNRHR2P1-201ENST00000555315 631 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 APAF1-209ENST00000550527 6581 ntAPPRIS ALT1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 AC010680.1-201ENST00000590024 3590 ntBASIC4.57□□□□□ -1.68
TMEM88BA6NKF7 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AL035425.3-201ENST00000564206 4996 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 MIR335-201ENST00000362173 94 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 Y_RNA.143-201ENST00000363520 106 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RNU1-33P-201ENST00000364249 162 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 SNORA26.3-201ENST00000391119 136 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RNU6-1093P-201ENST00000391194 107 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RN7SKP167-201ENST00000411047 285 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RPS26P42-201ENST00000413485 326 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 BTF3L4P4-201ENST00000506381 449 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 RN7SKP49-201ENST00000516675 260 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AC027288.2-201ENST00000553028 243 ntBASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
TMEM88BA6NKF7 MIR5695-201ENST00000579717 85 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 169.5 ms