Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 CBFB-203ENST00000561924 584 ntTSL 5 BASIC20.86■□□□□ 0.93
COL1A2P08123 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 HYMAI.1-201ENST00000620949 238 ntBASIC20.86■□□□□ 0.93
COL1A2P08123 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 AL512353.2-201ENST00000448759 1962 ntBASIC20.86■□□□□ 0.93
COL1A2P08123 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.86■□□□□ 0.93
COL1A2P08123 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.86■□□□□ 0.93
COL1A2P08123 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.86■□□□□ 0.93
COL1A2P08123 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
COL1A2P08123 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COL1A2P08123 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
COL1A2P08123 PCED1CP-201ENST00000419887 785 ntBASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A2P08123 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.85■□□□□ 0.93
COL1A2P08123 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
COL1A2P08123 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
COL1A2P08123 IRX1P1-201ENST00000438849 1838 ntBASIC20.85■□□□□ 0.93
COL1A2P08123 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A2P08123 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.85■□□□□ 0.93
COL1A2P08123 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A2P08123 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.85■□□□□ 0.93
COL1A2P08123 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.85■□□□□ 0.93
COL1A2P08123 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.85■□□□□ 0.93
COL1A2P08123 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.85■□□□□ 0.93
COL1A2P08123 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COL1A2P08123 AL136038.3-201ENST00000561909 1096 ntBASIC20.85■□□□□ 0.93
COL1A2P08123 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC20.85■□□□□ 0.93
COL1A2P08123 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.85■□□□□ 0.93
COL1A2P08123 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC20.84■□□□□ 0.93
COL1A2P08123 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.84■□□□□ 0.93
COL1A2P08123 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 FP475955.4-201ENST00000623131 1990 ntBASIC20.84■□□□□ 0.93
COL1A2P08123 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 RCC2P3-201ENST00000418112 1537 ntBASIC20.84■□□□□ 0.93
COL1A2P08123 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
COL1A2P08123 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.84■□□□□ 0.93
COL1A2P08123 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.84■□□□□ 0.93
COL1A2P08123 UPK3BP1-201ENST00000428678 509 ntBASIC20.84■□□□□ 0.93
COL1A2P08123 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.84■□□□□ 0.93
COL1A2P08123 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.84■□□□□ 0.93
COL1A2P08123 ZNF444P1-201ENST00000559497 298 ntBASIC20.84■□□□□ 0.93
COL1A2P08123 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC20.84■□□□□ 0.93
COL1A2P08123 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC20.84■□□□□ 0.93
COL1A2P08123 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
COL1A2P08123 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COL1A2P08123 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
COL1A2P08123 AC005332.1-201ENST00000577698 1310 ntBASIC20.83■□□□□ 0.93
COL1A2P08123 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.83■□□□□ 0.93
COL1A2P08123 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
COL1A2P08123 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC20.83■□□□□ 0.93
COL1A2P08123 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A2P08123 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.83■□□□□ 0.93
COL1A2P08123 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A2P08123 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
COL1A2P08123 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
COL1A2P08123 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
COL1A2P08123 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.83■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms