Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC136618.2-201ENST00000575091 400 ntBASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 VN1R82P-201ENST00000601481 356 ntBASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MTND3P19-201ENST00000603825 345 ntBASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC010900.2-201ENST00000604508 210 ntBASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL356596.1-201ENST00000624230 379 ntBASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MTND5P10-201ENST00000603719 1809 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-487P-201ENST00000365430 104 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNA5SP100-201ENST00000410903 110 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNA5SP59-201ENST00000410922 110 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL109924.3-201ENST00000413324 393 ntTSL 2 BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MTCO3P5-201ENST00000433620 714 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 FDX1P2-201ENST00000450769 375 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 snoU109.2-201ENST00000459316 135 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AP001025.1-201ENST00000486139 332 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 HMGB1P30-201ENST00000492455 606 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC016550.1-201ENST00000505348 785 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC010587.2-201ENST00000511727 448 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC117532.1-201ENST00000514638 323 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNVU1-2-201ENST00000516326 135 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-677P-201ENST00000516914 101 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-250P-201ENST00000516958 103 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC091163.3-201ENST00000518269 1144 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AK6P1-201ENST00000540219 478 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 WISP1-OT1-201ENST00000602893 642 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL670379.2-201ENST00000604983 252 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL670379.4-201ENST00000605279 254 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-88P-201ENST00000606801 100 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MIR15A-201ENST00000607334 83 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC072039.2-201ENST00000608883 439 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC091834.1-201ENST00000614543 472 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC093648.1-201ENST00000623546 606 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 ZNF680P1-201ENST00000436625 1469 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC006026.1-201ENST00000444025 1803 ntBASIC1.17□□□□□ -2.22
TRAV8-1A0A0A6YYK1 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AP000648.3-201ENST00000623539 4507 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-1210P-201ENST00000363775 107 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNY3P13-201ENST00000365542 102 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-395P-201ENST00000365662 106 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6-723P-201ENST00000383973 107 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MIR1304-201ENST00000408243 91 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RN7SKP51-201ENST00000410781 304 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 ELOCP17-201ENST00000414751 326 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 ELOCP9-201ENST00000418624 239 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL365338.1-201ENST00000422282 858 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 USP9YP18-201ENST00000425912 695 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 HMGB1P18-201ENST00000438801 619 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC007677.1-201ENST00000445757 515 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL353752.1-201ENST00000454946 260 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 SNORD97-201ENST00000459187 142 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RN7SKP256-201ENST00000517201 314 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC010376.1-201ENST00000522101 334 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC013828.2-201ENST00000532487 235 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 MIR4298-201ENST00000584380 73 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC104984.5-201ENST00000586878 94 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 KC877982.1-201ENST00000602313 470 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC078795.2-201ENST00000602835 1252 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC112220.3-201ENST00000605502 502 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC091965.4-201ENST00000607691 587 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AL391813.2-201ENST00000609113 322 ntBASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
TRAV8-1A0A0A6YYK1 AC092104.1-201ENST00000497346 1441 ntBASIC1.15□□□□□ -2.22
TRAV8-1A0A0A6YYK1 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 SNORD3E-201ENST00000362899 217 ntBASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 SNORA48.1-201ENST00000390879 135 ntBASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 CBX3P9-201ENST00000402326 552 ntBASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC1.15□□□□□ -2.23
TRAV8-1A0A0A6YYK1 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 181.2 ms