Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
PNKPQ96T60 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
PNKPQ96T60 RNU6-593P-201ENST00000364716 112 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 SNORA33.2-201ENST00000365413 134 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 SNORA22B-201ENST00000383876 138 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 RNU6-214P-201ENST00000384130 107 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 RNU6-1179P-201ENST00000384667 107 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 Z85995.1-201ENST00000415547 335 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 DBIP2-201ENST00000419076 262 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 ATG3P1-201ENST00000419507 911 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 PMCHL1-202ENST00000423102 261 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 RPL27AP8-201ENST00000424277 446 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 HMGB1P9-201ENST00000429856 646 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.64□□□□□ -1.83
PNKPQ96T60 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC3.64□□□□□ -1.83
PNKPQ96T60 BX510359.1-201ENST00000456973 237 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 HMGB3P30-201ENST00000457863 606 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC008155.2-201ENST00000464337 397 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC3.64□□□□□ -1.83
PNKPQ96T60 RPL31P60-201ENST00000478450 367 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 SNORA31.8-201ENST00000516327 108 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 RNU6-1315P-201ENST00000517187 99 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 SNRPGP18-201ENST00000553000 214 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.64□□□□□ -1.83
PNKPQ96T60 MIR3921-201ENST00000577308 85 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PNKPQ96T60 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.64□□□□□ -1.83
PNKPQ96T60 CYP2C61P-201ENST00000604072 290 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC016925.2-201ENST00000605108 242 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AL160281.1-201ENST00000605307 311 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AP000654.2-201ENST00000605633 586 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC107294.1-201ENST00000609524 467 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 AC090132.2-201ENST00000615881 347 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 U4.6-201ENST00000621618 127 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.64□□□□□ -1.83
PNKPQ96T60 MTND5P10-201ENST00000603719 1809 ntBASIC3.64□□□□□ -1.83
PNKPQ96T60 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
PNKPQ96T60 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.64□□□□□ -1.83
PNKPQ96T60 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.64□□□□□ -1.83
PNKPQ96T60 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
PNKPQ96T60 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.64□□□□□ -1.83
PNKPQ96T60 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.63□□□□□ -1.83
PNKPQ96T60 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU4-35P-201ENST00000362588 141 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 RNA5SP383-201ENST00000362934 120 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU6-306P-201ENST00000384617 107 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU2-3P-201ENST00000410144 191 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU6-607P-201ENST00000411283 108 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.63□□□□□ -1.83
PNKPQ96T60 CYCSP33-201ENST00000414485 327 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU7-138P-201ENST00000459479 64 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 RPL7P42-201ENST00000481005 679 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AC078817.1-201ENST00000492623 435 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AC026801.1-201ENST00000497178 464 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AC096745.1-201ENST00000509945 370 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AC026782.1-201ENST00000512952 449 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 Y_RNA.670-201ENST00000516255 105 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 SNORA70.16-201ENST00000516390 95 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU1-54P-201ENST00000517181 120 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.63□□□□□ -1.83
PNKPQ96T60 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.63□□□□□ -1.83
PNKPQ96T60 MIR1273C-201ENST00000578669 77 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 LRRC37A5P-203ENST00000580181 585 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 ELOCP5-201ENST00000604924 333 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 RNU6-85P-201ENST00000605989 107 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AC009229.3-201ENST00000608056 282 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 AP002826.1-201ENST00000608835 315 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
PNKPQ96T60 MIR8058-201ENST00000615737 89 ntBASIC3.63□□□□□ -1.83
PNKPQ96T60 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
PNKPQ96T60 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.63□□□□□ -1.83
PNKPQ96T60 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
PNKPQ96T60 Y_RNA.404-201ENST00000383978 102 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 SNORA75B-201ENST00000384053 137 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RNU6-1160P-201ENST00000384546 104 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 MIR301A-201ENST00000385261 86 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 SNORD73A-201ENST00000386062 65 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 Y_RNA.594-201ENST00000410373 140 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RNU6-1050P-201ENST00000410388 107 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RNA5SP120-201ENST00000410900 112 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.62□□□□□ -1.83
PNKPQ96T60 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.62□□□□□ -1.83
PNKPQ96T60 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.62□□□□□ -1.83
PNKPQ96T60 AL356968.1-201ENST00000416622 474 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AL353621.1-201ENST00000418219 243 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC007919.1-201ENST00000429380 217 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.62□□□□□ -1.83
PNKPQ96T60 AL137792.2-201ENST00000443484 235 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC3.62□□□□□ -1.83
PNKPQ96T60 U3.44-201ENST00000458938 192 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RN7SL807P-201ENST00000470923 297 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AP000926.1-201ENST00000479573 241 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC097473.1-201ENST00000508142 408 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 AC008716.1-201ENST00000511084 513 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 SMURF2P1-201ENST00000514992 481 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RNU1-86P-201ENST00000516108 154 ntBASIC3.62□□□□□ -1.83
PNKPQ96T60 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms