Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 SUB1P2-201ENST00000556401 297 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC2.34□□□□□ -2.03
HDAC3O15379 MIR4801-201ENST00000582704 82 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 MIR7106-201ENST00000612419 65 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 SDR42E1P2-201ENST00000614861 481 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 HMGB1P24-202ENST00000615653 685 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AC010133.1-201ENST00000615809 842 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 U6atac.1-201ENST00000616025 117 ntBASIC2.34□□□□□ -2.03
HDAC3O15379 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC2.34□□□□□ -2.03
HDAC3O15379 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC2.34□□□□□ -2.03
HDAC3O15379 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.34□□□□□ -2.03
HDAC3O15379 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
HDAC3O15379 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC2.34□□□□□ -2.04
HDAC3O15379 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.04
HDAC3O15379 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC2.34□□□□□ -2.04
HDAC3O15379 AC005336.3-201ENST00000623833 2679 ntBASIC2.34□□□□□ -2.04
HDAC3O15379 ELF2P3-201ENST00000445099 1506 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.33□□□□□ -2.04
HDAC3O15379 HSPE1P11-201ENST00000339579 310 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.33□□□□□ -2.04
HDAC3O15379 Y_RNA.1-201ENST00000352915 104 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 RNU6-223P-201ENST00000362830 107 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 RNU6-1284P-201ENST00000363701 100 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 Y_RNA.248-201ENST00000364501 109 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 Y_RNA.256-201ENST00000364594 104 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 RNU6-7-201ENST00000364784 107 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 RNU6-8-201ENST00000365467 107 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 RNU6-74P-201ENST00000384235 107 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 MIR558-201ENST00000384920 94 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HDAC3O15379 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
HDAC3O15379 RNU6-278P-201ENST00000390945 109 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 U3.26-201ENST00000391236 204 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 NDUFS5P1-201ENST00000405668 289 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AL355497.1-201ENST00000406262 551 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 TXNP7-201ENST00000406296 293 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC3O15379 RNU2-62P-201ENST00000410868 191 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC3O15379 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HDAC3O15379 AC009414.1-201ENST00000427200 443 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AL596276.1-201ENST00000434465 418 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AC002486.1-201ENST00000435098 391 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC3O15379 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
HDAC3O15379 AC020550.1-201ENST00000447385 163 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 PSPHP1-201ENST00000450062 261 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AL844175.1-201ENST00000455153 323 ntTSL 5 BASIC2.33□□□□□ -2.04
HDAC3O15379 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC2.33□□□□□ -2.04
HDAC3O15379 AL049873.1-201ENST00000480540 376 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 RPL36AP51-201ENST00000487216 318 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AC090096.1-201ENST00000489168 390 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AC007182.2-201ENST00000489251 402 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 TTC39CP1-201ENST00000512513 755 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 HMGN1P28-201ENST00000521340 364 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC3O15379 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.33□□□□□ -2.04
HDAC3O15379 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC3O15379 AC023824.2-201ENST00000566185 400 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AC092325.1-201ENST00000566449 554 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.33□□□□□ -2.04
HDAC3O15379 AP002360.4-201ENST00000606980 481 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 AP001596.2-201ENST00000608410 312 ntBASIC2.33□□□□□ -2.04
HDAC3O15379 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.33□□□□□ -2.04
HDAC3O15379 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC2.33□□□□□ -2.04
HDAC3O15379 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.33□□□□□ -2.04
HDAC3O15379 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
HDAC3O15379 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
HDAC3O15379 RNU4-12P-201ENST00000365233 139 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 RNU6-701P-201ENST00000384059 107 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 MIR181A1-201ENST00000385026 110 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
HDAC3O15379 RNU6-1197P-201ENST00000391183 107 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 UBE2V1P2-201ENST00000397758 440 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 AL590002.1-201ENST00000406554 418 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 BTF3P7-201ENST00000407097 488 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.32□□□□□ -2.04
HDAC3O15379 AL451054.2-201ENST00000420896 202 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HDAC3O15379 MTCYBP5-201ENST00000423752 1135 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 USP9YP18-201ENST00000425912 695 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.32□□□□□ -2.04
HDAC3O15379 MRPS10P2-201ENST00000431226 381 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 MTND3P21-201ENST00000433774 331 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.32□□□□□ -2.04
HDAC3O15379 RBMX2P4-201ENST00000441256 376 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 IFNA11P-201ENST00000446352 526 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 SNORD109B-201ENST00000458961 67 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 SNORD109A-201ENST00000459128 67 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 RNU7-23P-201ENST00000459465 62 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 RPL31P60-201ENST00000478450 367 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 AC092989.1-201ENST00000481235 277 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 RPL30P5-201ENST00000494923 336 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 RNA5SP320-201ENST00000516263 124 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 RNU6-1256P-201ENST00000516539 103 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.32□□□□□ -2.04
HDAC3O15379 AP006587.4-201ENST00000526053 529 ntBASIC2.32□□□□□ -2.04
HDAC3O15379 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
HDAC3O15379 AP001893.2-201ENST00000526949 202 ntBASIC2.32□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 192.3 ms