Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 AC006026.2-201ENST00000457376 180 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 Y_RNA.649-201ENST00000459077 103 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RPL23AP70-201ENST00000483361 460 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RN7SL558P-201ENST00000497468 299 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 ENPP7P11-201ENST00000505915 627 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AC091868.1-201ENST00000508746 304 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-436P-201ENST00000516171 114 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RPL23AP53-201ENST00000521854 457 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AC006199.1-201ENST00000548728 219 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AC138915.1-201ENST00000565427 1685 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AC074140.1-201ENST00000621617 208 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AC099654.7-201ENST00000635788 2127 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 MIR3674-201ENST00000636576 68 ntBASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
CCDC61Q9Y6R9 AL136164.4-201ENST00000625013 2135 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 AC090971.4-201ENST00000560291 1800 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-1249P-201ENST00000363237 111 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 Y_RNA.114-201ENST00000363265 113 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 Y_RNA.346-201ENST00000365385 112 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-72P-201ENST00000384285 79 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RN7SKP53-201ENST00000411337 315 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RPEP3-201ENST00000425462 676 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RPL10P17-201ENST00000453852 316 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RNA5SP116-201ENST00000516132 98 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-561P-201ENST00000516222 102 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RNU1-6P-201ENST00000516290 144 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-572P-201ENST00000516724 80 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 AL596275.2-206ENST00000641957 626 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 AC068700.1-201ENST00000565862 3754 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 AC093535.2-201ENST00000624769 2326 ntBASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC6.62□□□□□ -1.35
CCDC61Q9Y6R9 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-1082P-201ENST00000364574 107 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 AL512633.1-201ENST00000399931 655 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 SNORA11-201ENST00000408789 128 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 RPL30P12-201ENST00000474666 353 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-65P-201ENST00000516332 98 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 AC105129.1-201ENST00000560250 297 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 AL356157.2-201ENST00000605122 111 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 AC093671.1-201ENST00000624981 2929 ntBASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CCDC61Q9Y6R9 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 Y_RNA.245-201ENST00000364493 95 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-597P-201ENST00000365620 102 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-573P-201ENST00000383938 106 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 SNORA72.4-201ENST00000384174 132 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 U3.40-201ENST00000408706 208 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 RNU6-554P-201ENST00000410466 106 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 UBE2CP3-201ENST00000502715 450 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 TBCA-207ENST00000520039 157 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AC107016.1-201ENST00000550463 337 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 ATP5J2P6-201ENST00000565203 266 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 SNORA74C-1-201ENST00000580726 201 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AP001318.4-201ENST00000616637 121 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AC131238.1-201ENST00000617135 328 ntBASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.6□□□□□ -1.35
CCDC61Q9Y6R9 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 Z82209.1-201ENST00000422141 2135 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 AL450345.1-202ENST00000605741 3881 ntBASIC6.59□□□□□ -1.35
CCDC61Q9Y6R9 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 167.9 ms