Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 AC128676.1-201ENST00000454392 318 ntBASIC19.8■□□□□ 0.76
RFX6Q8HWS3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 AC110285.5-201ENST00000611501 352 ntBASIC19.8■□□□□ 0.76
RFX6Q8HWS3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RFX6Q8HWS3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 TSPY21P-201ENST00000433481 731 ntBASIC19.79■□□□□ 0.76
RFX6Q8HWS3 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RFX6Q8HWS3 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 AC133681.1-201ENST00000465482 601 ntBASIC19.78■□□□□ 0.76
RFX6Q8HWS3 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 C1QBPP2-201ENST00000528754 825 ntBASIC19.78■□□□□ 0.76
RFX6Q8HWS3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.78■□□□□ 0.76
RFX6Q8HWS3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.77■□□□□ 0.76
RFX6Q8HWS3 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 POU5F1P3-201ENST00000428824 1078 ntBASIC19.77■□□□□ 0.76
RFX6Q8HWS3 TSPY23P-201ENST00000440136 739 ntBASIC19.77■□□□□ 0.76
RFX6Q8HWS3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RFX6Q8HWS3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RFX6Q8HWS3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RFX6Q8HWS3 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms