Protein–RNA interactions for Protein: Q12950

FOXD4, Forkhead box protein D4, humanhuman

Predicted RBP Predictions only

Length 439 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXD4Q12950 AC010468.2-201ENST00000511981 438 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXD4Q12950 RPL23AP94-201ENST00000512518 302 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXD4Q12950 RNU6-143P-201ENST00000516942 93 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 OR5B19P-201ENST00000531766 928 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 NTS-203ENST00000551529 801 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXD4Q12950 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXD4Q12950 MIR4738-201ENST00000579134 87 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 AC098848.2-201ENST00000588023 330 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXD4Q12950 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.38□□□□□ -1.87
FOXD4Q12950 AL391813.1-201ENST00000603098 260 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 AL391646.1-201ENST00000603860 190 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 AC004492.1-201ENST00000607036 742 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXD4Q12950 MIR3651-201ENST00000630427 90 ntBASIC3.38□□□□□ -1.87
FOXD4Q12950 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXD4Q12950 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.38□□□□□ -1.87
FOXD4Q12950 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.38□□□□□ -1.87
FOXD4Q12950 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.38□□□□□ -1.87
FOXD4Q12950 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.38□□□□□ -1.87
FOXD4Q12950 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXD4Q12950 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXD4Q12950 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXD4Q12950 MTND5P30-201ENST00000452896 1731 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 UBE2L2-201ENST00000254302 429 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 Y_RNA.159-201ENST00000363674 87 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 RNU6-512P-201ENST00000364438 103 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 RNU5A-6P-201ENST00000384136 116 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 GSTA9P-201ENST00000406231 611 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXD4Q12950 AL035423.1-201ENST00000420331 213 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 PIGFP2-201ENST00000421400 651 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXD4Q12950 RAC1P6-201ENST00000423911 575 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 OR2AS1P-201ENST00000427827 319 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXD4Q12950 AL159987.2-201ENST00000432754 307 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 NEFMP1-201ENST00000443423 1006 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXD4Q12950 BX510359.1-201ENST00000456973 237 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 TRBV1-201ENST00000476502 284 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 RPS29P20-201ENST00000489592 171 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
FOXD4Q12950 AC091133.4-201ENST00000511142 308 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 RNU7-51P-201ENST00000516560 62 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 SCARNA14-201ENST00000516903 136 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 RNU6-1092P-201ENST00000516955 87 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXD4Q12950 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXD4Q12950 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.37□□□□□ -1.87
FOXD4Q12950 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC3.37□□□□□ -1.87
FOXD4Q12950 MIR3922-201ENST00000585192 84 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 NRBF2P1-201ENST00000587407 859 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC067852.3-201ENST00000589177 561 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC025449.1-201ENST00000603896 529 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AP002360.4-201ENST00000606980 481 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC007684.1-201ENST00000609671 477 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC109347.2-201ENST00000610220 349 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 AC130324.3-201ENST00000614165 542 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.37□□□□□ -1.87
FOXD4Q12950 MIR6863-201ENST00000636112 90 ntBASIC3.37□□□□□ -1.87
FOXD4Q12950 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
FOXD4Q12950 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
FOXD4Q12950 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
FOXD4Q12950 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
FOXD4Q12950 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD4Q12950 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD4Q12950 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
FOXD4Q12950 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXD4Q12950 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXD4Q12950 Y_RNA.372-201ENST00000365599 102 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 RNU6-946P-201ENST00000383878 107 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 RNU6-1215P-201ENST00000384441 102 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 SNORA3.3-201ENST00000408712 125 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXD4Q12950 AL353193.1-201ENST00000421444 268 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AL139247.1-201ENST00000422768 325 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 RPL36AP53-201ENST00000432891 316 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXD4Q12950 RPS29P31-201ENST00000446147 164 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC132479.1-201ENST00000449160 144 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXD4Q12950 FABP5P13-201ENST00000452144 328 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 MTCO2P29-201ENST00000465212 189 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC107401.1-201ENST00000503426 685 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.36□□□□□ -1.87
FOXD4Q12950 AC108078.1-201ENST00000508073 725 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXD4Q12950 APOOP4-201ENST00000513530 597 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 RNU6-720P-201ENST00000516363 108 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 RNU2-10P-201ENST00000516375 211 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 RNU6-703P-201ENST00000516946 107 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC090136.1-201ENST00000520009 240 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXD4Q12950 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.36□□□□□ -1.87
FOXD4Q12950 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.36□□□□□ -1.87
FOXD4Q12950 DEFB131E-202ENST00000602581 683 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AC006077.1-201ENST00000604746 343 ntBASIC3.36□□□□□ -1.87
FOXD4Q12950 AL158032.1-201ENST00000605401 106 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 174 ms