Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 RNU5A-1-201ENST00000362698 116 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 AC068287.1-201ENST00000430283 295 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 CYCSP32-201ENST00000440548 321 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 U8.19-201ENST00000459095 133 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 RN7SL354P-201ENST00000469282 294 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 RNU6-1095P-201ENST00000516148 108 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 RN7SKP276-201ENST00000516242 268 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 RNU6-155P-201ENST00000516347 100 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 RNU6-1198P-201ENST00000516904 67 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 AL138963.2-201ENST00000605137 226 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 AC034238.1-215ENST00000609792 219 ntTSL 5 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 SCARNA15-201ENST00000607520 4325 ntBASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
CCDC61Q9Y6R9 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 MIR626-201ENST00000385032 94 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 RNU6-588P-201ENST00000410281 105 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 AL513331.1-201ENST00000411908 397 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 BX510359.2-201ENST00000417920 305 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 COX6CP13-201ENST00000428703 226 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 AL353748.1-201ENST00000440753 474 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 RPL23AP24-201ENST00000458203 385 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 AL078604.3-201ENST00000615580 211 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
CCDC61Q9Y6R9 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 Y_RNA.101-201ENST00000363154 102 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 Y_RNA.251-201ENST00000364551 99 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 Y_RNA.521-201ENST00000384560 114 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC018442.3-201ENST00000523025 183 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 HMGN2P47-201ENST00000559378 272 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC133485.4-201ENST00000561835 220 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC138907.4-201ENST00000570107 226 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 UGP2-230ENST00000626380 276 ntTSL 5 BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 AC018529.3-201ENST00000624212 2254 ntBASIC6.84□□□□□ -1.31
CCDC61Q9Y6R9 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC61Q9Y6R9 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
CCDC61Q9Y6R9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.84□□□□□ -1.32
CCDC61Q9Y6R9 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC6.84□□□□□ -1.32
CCDC61Q9Y6R9 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 RNU6-1167P-201ENST00000363227 94 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 RN7SKP145-201ENST00000363291 303 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 Y_RNA.294-201ENST00000364916 102 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 SNORA62-201ENST00000365493 153 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 SNORA70.10-201ENST00000384515 134 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 RNU6-768P-201ENST00000384683 107 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 RNA5SP332-201ENST00000391063 115 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 MIR298-201ENST00000401212 88 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AL591034.1-201ENST00000407447 340 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AL450023.3-201ENST00000440592 271 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 RPS27P1-201ENST00000450552 247 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 HSPE1P13-201ENST00000451143 297 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AC146944.2-203ENST00000502493 354 ntBASIC6.83□□□□□ -1.32
CCDC61Q9Y6R9 AC139495.1-202ENST00000513164 354 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 202.3 ms