Protein–RNA interactions for Protein: O43474

KLF4, Krueppel-like factor 4, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF4O43474 AL159987.2-201ENST00000432754 307 ntBASIC4.21□□□□□ -1.74
KLF4O43474 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.21□□□□□ -1.74
KLF4O43474 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
KLF4O43474 AC133134.1-201ENST00000466800 359 ntBASIC4.21□□□□□ -1.74
KLF4O43474 AC108022.1-201ENST00000493466 478 ntBASIC4.21□□□□□ -1.74
KLF4O43474 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 RNU6-976P-201ENST00000516086 111 ntBASIC4.21□□□□□ -1.74
KLF4O43474 RNU6-264P-201ENST00000517134 104 ntBASIC4.21□□□□□ -1.74
KLF4O43474 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.21□□□□□ -1.74
KLF4O43474 RN7SL690P-201ENST00000582087 240 ntBASIC4.21□□□□□ -1.74
KLF4O43474 MIR4273-201ENST00000582824 84 ntBASIC4.21□□□□□ -1.74
KLF4O43474 AL354984.3-201ENST00000604803 325 ntBASIC4.21□□□□□ -1.74
KLF4O43474 AC011890.2-201ENST00000613393 294 ntBASIC4.21□□□□□ -1.74
KLF4O43474 AL138880.2-201ENST00000616214 239 ntBASIC4.21□□□□□ -1.74
KLF4O43474 USP12-203ENST00000620323 349 ntTSL 3 BASIC4.21□□□□□ -1.74
KLF4O43474 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC4.21□□□□□ -1.74
KLF4O43474 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 ADGRL3-203ENST00000506700 4838 ntTSL 5 BASIC4.21□□□□□ -1.74
KLF4O43474 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC4.21□□□□□ -1.74
KLF4O43474 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
KLF4O43474 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
KLF4O43474 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
KLF4O43474 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.2□□□□□ -1.74
KLF4O43474 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.2□□□□□ -1.74
KLF4O43474 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 snosnR66.1-201ENST00000391095 99 ntBASIC4.2□□□□□ -1.74
KLF4O43474 SNORA75.6-201ENST00000391318 127 ntBASIC4.2□□□□□ -1.74
KLF4O43474 HDGFP1-201ENST00000405943 252 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AP000567.1-201ENST00000406413 156 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AL513475.1-201ENST00000406602 315 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.2□□□□□ -1.74
KLF4O43474 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC4.2□□□□□ -1.74
KLF4O43474 NOTCH2P1-201ENST00000443481 624 ntBASIC4.2□□□□□ -1.74
KLF4O43474 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC4.2□□□□□ -1.74
KLF4O43474 AL451050.1-201ENST00000450126 415 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.2□□□□□ -1.74
KLF4O43474 RN7SL354P-201ENST00000469282 294 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC022795.1-201ENST00000473808 480 ntBASIC4.2□□□□□ -1.74
KLF4O43474 RPL12P20-201ENST00000475538 479 ntBASIC4.2□□□□□ -1.74
KLF4O43474 RN7SL41P-201ENST00000476144 297 ntBASIC4.2□□□□□ -1.74
KLF4O43474 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC4.2□□□□□ -1.74
KLF4O43474 RPL7P42-201ENST00000481005 679 ntBASIC4.2□□□□□ -1.74
KLF4O43474 RPL36AP41-201ENST00000493820 306 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC4.2□□□□□ -1.74
KLF4O43474 RNU6-1213P-201ENST00000517075 94 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC107016.1-201ENST00000550463 337 ntBASIC4.2□□□□□ -1.74
KLF4O43474 SNRPGP18-201ENST00000553000 214 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC109446.1-201ENST00000566172 220 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC091178.1-203ENST00000584586 279 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC011494.1-201ENST00000596454 237 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.2□□□□□ -1.74
KLF4O43474 AC009314.1-201ENST00000603871 304 ntBASIC4.2□□□□□ -1.74
KLF4O43474 PART1_1.1-201ENST00000611761 217 ntBASIC4.2□□□□□ -1.74
KLF4O43474 uc_338.32-201ENST00000615087 172 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC068831.7-201ENST00000616954 363 ntBASIC4.2□□□□□ -1.74
KLF4O43474 AC006111.3-201ENST00000622137 383 ntBASIC4.2□□□□□ -1.74
KLF4O43474 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.2□□□□□ -1.74
KLF4O43474 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
KLF4O43474 AL136164.3-201ENST00000624429 3978 ntBASIC4.2□□□□□ -1.74
KLF4O43474 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 OTUD4P1-201ENST00000237841 3067 ntBASIC4.2□□□□□ -1.74
KLF4O43474 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.2□□□□□ -1.74
KLF4O43474 MAPK10-303ENST00000641324 3959 ntBASIC4.2□□□□□ -1.74
KLF4O43474 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC4.2□□□□□ -1.74
KLF4O43474 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
KLF4O43474 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KLF4O43474 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
KLF4O43474 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC4.19□□□□□ -1.74
KLF4O43474 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.19□□□□□ -1.74
KLF4O43474 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KLF4O43474 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC4.19□□□□□ -1.74
KLF4O43474 Y_RNA.162-201ENST00000363683 102 ntBASIC4.19□□□□□ -1.74
KLF4O43474 RNU6-596P-201ENST00000365395 98 ntBASIC4.19□□□□□ -1.74
KLF4O43474 Y_RNA.395-201ENST00000383945 109 ntBASIC4.19□□□□□ -1.74
KLF4O43474 RNU6-1040P-201ENST00000383974 107 ntBASIC4.19□□□□□ -1.74
KLF4O43474 RNA5SP332-201ENST00000391063 115 ntBASIC4.19□□□□□ -1.74
KLF4O43474 RPL23AP48-201ENST00000406913 488 ntBASIC4.19□□□□□ -1.74
KLF4O43474 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.19□□□□□ -1.74
KLF4O43474 ISCUP1-201ENST00000454451 448 ntBASIC4.19□□□□□ -1.74
KLF4O43474 HMGN2P7-201ENST00000456186 273 ntBASIC4.19□□□□□ -1.74
KLF4O43474 snoU13.1-201ENST00000459157 104 ntBASIC4.19□□□□□ -1.74
KLF4O43474 SNRPGP3-201ENST00000469405 227 ntBASIC4.19□□□□□ -1.74
KLF4O43474 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
KLF4O43474 SCARNA15.1-201ENST00000516384 125 ntBASIC4.19□□□□□ -1.74
KLF4O43474 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.19□□□□□ -1.74
KLF4O43474 AC020661.2-201ENST00000560114 134 ntBASIC4.19□□□□□ -1.74
KLF4O43474 MIR3171-201ENST00000584270 74 ntBASIC4.19□□□□□ -1.74
KLF4O43474 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 177.2 ms