Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB9Q9Y5E1 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC5.32□□□□□ -1.56
PCDHB9Q9Y5E1 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.32□□□□□ -1.56
PCDHB9Q9Y5E1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PCDHB9Q9Y5E1 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 RNU6-1301P-201ENST00000362724 104 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 SNORD63-201ENST00000384262 68 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 RPL7AP49-201ENST00000429522 581 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AL591438.1-201ENST00000433508 581 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC098831.1-201ENST00000440661 216 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 TMSB4XP3-201ENST00000445144 114 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 HSPE1P25-201ENST00000455484 251 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 RPL23AP24-201ENST00000458203 385 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 RN7SL481P-201ENST00000477764 299 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC108145.1-201ENST00000503770 153 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 SNORA31.19-201ENST00000517079 126 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC087441.2-201ENST00000529141 262 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC011487.3-201ENST00000593607 453 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 Z83818.1-201ENST00000603584 150 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AP000346.3-201ENST00000622821 210 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 AC006065.5-201ENST00000623427 349 ntBASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
PCDHB9Q9Y5E1 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 LINC01109-201ENST00000603837 3081 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 RNU4-90P-201ENST00000362773 141 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 RNU6-336P-201ENST00000364891 107 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 RN7SKP153-201ENST00000365026 316 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 RNU6-166P-201ENST00000384371 107 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 COX6CP10-201ENST00000416832 224 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 RPL19P16-201ENST00000433839 588 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 TOMM22P6-201ENST00000465035 409 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 COX6CP14-201ENST00000469580 174 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AKIRIN2P1-201ENST00000505898 352 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 MLLT10P2-201ENST00000506434 249 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AC004980.4-201ENST00000513375 203 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 IGHVII-62-1-201ENST00000519283 235 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 NDUFB4P11-201ENST00000560510 395 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 MIR4458-201ENST00000578872 75 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AC091905.4-201ENST00000623432 202 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 U4.7-201ENST00000638126 106 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 AL592437.2-201ENST00000421655 2434 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 MUC2-202ENST00000613187 4845 ntBASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
PCDHB9Q9Y5E1 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 Y_RNA.44-201ENST00000362676 108 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 RNU5E-7P-201ENST00000365290 117 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 RNA5SP240-201ENST00000365355 128 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 GPS2P1-201ENST00000411761 986 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 TMSB10P2-201ENST00000416049 131 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AL358453.1-201ENST00000422522 250 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC009127.1-201ENST00000467090 155 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 RPS26P21-201ENST00000475397 348 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 OR7H2P-201ENST00000513483 306 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC010265.1-201ENST00000513509 211 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AL671862.1-201ENST00000515851 349 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 RNU6-1256P-201ENST00000516539 103 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 RNA5SP290-201ENST00000517133 127 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 RAB9BP1-201ENST00000519581 626 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 MRPS36P4-201ENST00000534436 298 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC024940.3-201ENST00000538551 316 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 MDM2-232ENST00000544561 213 ntTSL 5 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 MIR3921-201ENST00000577308 85 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC011447.4-201ENST00000587562 111 ntBASIC5.29□□□□□ -1.56
PCDHB9Q9Y5E1 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 192.7 ms