Protein–RNA interactions for Protein: Q5SQN1

SNAP47, Synaptosomal-associated protein 47, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47Q5SQN1 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 PCDHAC2-203ENST00000615316 3011 ntBASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAP47Q5SQN1 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 NTF6B-201ENST00000591913 560 ntBASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAP47Q5SQN1 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNAP47Q5SQN1 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 LETM1P2-201ENST00000597330 2178 ntBASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 HMGA1P5-201ENST00000412453 271 ntBASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.51■□□□□ 0.55
SNAP47Q5SQN1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.5■□□□□ 0.55
SNAP47Q5SQN1 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms