Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC16.57■□□□□ 0.24
SFTPBP07988 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.57■□□□□ 0.24
SFTPBP07988 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SFTPBP07988 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SFTPBP07988 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.56■□□□□ 0.24
SFTPBP07988 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SFTPBP07988 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SFTPBP07988 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.56■□□□□ 0.24
SFTPBP07988 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SFTPBP07988 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.56■□□□□ 0.24
SFTPBP07988 AC098590.1-201ENST00000468126 897 ntBASIC16.56■□□□□ 0.24
SFTPBP07988 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SFTPBP07988 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
SFTPBP07988 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
SFTPBP07988 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SFTPBP07988 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SFTPBP07988 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
SFTPBP07988 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.56■□□□□ 0.24
SFTPBP07988 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.55■□□□□ 0.24
SFTPBP07988 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
SFTPBP07988 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.55■□□□□ 0.24
SFTPBP07988 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
SFTPBP07988 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC16.55■□□□□ 0.24
SFTPBP07988 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
SFTPBP07988 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
SFTPBP07988 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 RPS2P52-201ENST00000469610 820 ntBASIC16.55■□□□□ 0.24
SFTPBP07988 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.55■□□□□ 0.24
SFTPBP07988 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.55■□□□□ 0.24
SFTPBP07988 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.55■□□□□ 0.24
SFTPBP07988 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SFTPBP07988 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SFTPBP07988 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.55■□□□□ 0.24
SFTPBP07988 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SFTPBP07988 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SFTPBP07988 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.54■□□□□ 0.24
SFTPBP07988 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.54■□□□□ 0.24
SFTPBP07988 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
SFTPBP07988 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC16.54■□□□□ 0.24
SFTPBP07988 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
SFTPBP07988 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
SFTPBP07988 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC16.54■□□□□ 0.24
SFTPBP07988 AC233263.1-201ENST00000578059 224 ntBASIC16.54■□□□□ 0.24
SFTPBP07988 MMD2-204ENST00000612910 778 ntTSL 5 BASIC16.54■□□□□ 0.24
SFTPBP07988 AC066615.1-201ENST00000640911 628 ntBASIC16.54■□□□□ 0.24
SFTPBP07988 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.54■□□□□ 0.24
SFTPBP07988 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC16.54■□□□□ 0.24
SFTPBP07988 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
SFTPBP07988 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 HR-201ENST00000312841 5351 ntTSL 5 BASIC16.53■□□□□ 0.24
SFTPBP07988 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.53■□□□□ 0.24
SFTPBP07988 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
SFTPBP07988 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms