Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 AC116562.3-201ENST00000506136 177 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AC105417.1-201ENST00000514691 285 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AC107953.1-201ENST00000522216 297 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.11□□□□□ -1.75
PNKPQ96T60 DEFB108D-201ENST00000527787 222 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AC068587.5-201ENST00000528506 175 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC4.11□□□□□ -1.75
PNKPQ96T60 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.11□□□□□ -1.75
PNKPQ96T60 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.11□□□□□ -1.75
PNKPQ96T60 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.11□□□□□ -1.75
PNKPQ96T60 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC4.11□□□□□ -1.75
PNKPQ96T60 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.11□□□□□ -1.75
PNKPQ96T60 AC044792.1-201ENST00000593294 196 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AL031176.1-201ENST00000604554 466 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AC016727.1-205ENST00000605437 569 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC4.11□□□□□ -1.75
PNKPQ96T60 AC135507.2-201ENST00000612443 309 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 ATM-228ENST00000639240 498 ntTSL 5 BASIC4.11□□□□□ -1.75
PNKPQ96T60 ATM-230ENST00000640388 578 ntTSL 5 BASIC4.11□□□□□ -1.75
PNKPQ96T60 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC4.11□□□□□ -1.75
PNKPQ96T60 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.11□□□□□ -1.75
PNKPQ96T60 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 CCDC110-202ENST00000393540 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 AC008725.1-201ENST00000605123 2263 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AL157700.1-201ENST00000561973 1432 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
PNKPQ96T60 MTCO1P9-201ENST00000505577 1534 ntBASIC4.11□□□□□ -1.75
PNKPQ96T60 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PNKPQ96T60 AC073073.2-201ENST00000609827 2578 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC4.1□□□□□ -1.75
PNKPQ96T60 MTND5P17-201ENST00000418405 1603 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 LIPI-201ENST00000344577 1652 ntAPPRIS P2 TSL 1 (best) BASIC4.1□□□□□ -1.75
PNKPQ96T60 OSBPL9P4-201ENST00000371707 1800 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.1□□□□□ -1.75
PNKPQ96T60 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PNKPQ96T60 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.1□□□□□ -1.75
PNKPQ96T60 AL136372.1-201ENST00000403060 228 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 RNU2-39P-201ENST00000410604 198 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 EEF1A1P40-201ENST00000412883 573 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 DUTP6-201ENST00000425573 462 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 RWDD4P2-201ENST00000426392 563 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 SRIP2-201ENST00000428470 166 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 GOT2P5-201ENST00000433995 546 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.1□□□□□ -1.75
PNKPQ96T60 AC005094.1-201ENST00000440420 368 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AC016696.1-201ENST00000446949 318 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AL358232.1-201ENST00000448030 501 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC4.1□□□□□ -1.75
PNKPQ96T60 MRPS17P3-201ENST00000465453 385 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 RPL7L1P8-201ENST00000469911 741 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AC106872.2-201ENST00000494303 480 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.1□□□□□ -1.75
PNKPQ96T60 RNU6-1153P-201ENST00000516760 105 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 RN7SKP219-201ENST00000516825 296 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 RNU6-1231P-201ENST00000517185 103 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 BTF3P12-201ENST00000519620 469 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC4.1□□□□□ -1.75
PNKPQ96T60 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.1□□□□□ -1.75
PNKPQ96T60 AP003385.6-201ENST00000531603 374 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 OR8L1P-201ENST00000534005 955 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 CYCSP30-201ENST00000546447 172 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.1□□□□□ -1.75
PNKPQ96T60 CCDC178-211ENST00000581852 876 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
PNKPQ96T60 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.1□□□□□ -1.75
PNKPQ96T60 MIR4293-201ENST00000584305 78 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.1□□□□□ -1.75
PNKPQ96T60 AC009248.2-201ENST00000619826 254 ntBASIC4.1□□□□□ -1.75
PNKPQ96T60 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.1□□□□□ -1.75
PNKPQ96T60 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
PNKPQ96T60 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.1□□□□□ -1.75
PNKPQ96T60 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.09□□□□□ -1.75
PNKPQ96T60 ZNF33CP-201ENST00000432492 2030 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC244517.1-201ENST00000606030 2086 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
PNKPQ96T60 Y_RNA.166-201ENST00000363730 102 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNU6-188P-201ENST00000364207 107 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNU4-20P-201ENST00000365601 151 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNU6-637P-201ENST00000384050 107 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 MIR30B-201ENST00000384850 88 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 MIR3074-201ENST00000384885 81 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AL122016.1-201ENST00000403365 367 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 SNORA57.3-201ENST00000411095 141 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC097347.1-201ENST00000438499 517 ntTSL 3 BASIC4.09□□□□□ -1.75
PNKPQ96T60 RPL23AP33-201ENST00000442301 452 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNU7-182P-201ENST00000459009 62 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC004801.2-202ENST00000463559 283 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.09□□□□□ -1.75
PNKPQ96T60 RPS15AP36-201ENST00000492022 382 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RN7SL323P-201ENST00000494712 295 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC092436.1-201ENST00000506450 503 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.09□□□□□ -1.75
PNKPQ96T60 FGF7P4-201ENST00000509595 295 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 AC112206.3-201ENST00000514578 389 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNU7-30P-201ENST00000516835 62 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 RNA5SP179-201ENST00000517284 121 ntBASIC4.09□□□□□ -1.75
PNKPQ96T60 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.09□□□□□ -1.75
PNKPQ96T60 AC022690.1-201ENST00000526681 550 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 156.5 ms