Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 RPL35AP21-201ENST00000437667 333 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AC048351.1-202ENST00000449483 735 ntTSL 3 BASIC5.1□□□□□ -1.59
NFKB1P19838 RPS17P2-201ENST00000461663 408 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AC098869.1-201ENST00000481627 292 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AC008953.1-201ENST00000497334 318 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AC126177.3-201ENST00000551839 688 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.1□□□□□ -1.59
NFKB1P19838 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC5.1□□□□□ -1.59
NFKB1P19838 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC5.1□□□□□ -1.59
NFKB1P19838 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC5.1□□□□□ -1.59
NFKB1P19838 AL591926.8-201ENST00000616876 211 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 RNF123-214ENST00000629802 207 ntTSL 5 BASIC5.1□□□□□ -1.59
NFKB1P19838 MIR4496-201ENST00000635896 61 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 AL596275.2-204ENST00000641628 552 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NFKB1P19838 AL596275.2-206ENST00000641957 626 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
NFKB1P19838 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.1□□□□□ -1.59
NFKB1P19838 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
NFKB1P19838 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
NFKB1P19838 AL672167.1-205ENST00000641112 3080 ntBASIC5.1□□□□□ -1.59
NFKB1P19838 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
NFKB1P19838 THAP12P5-201ENST00000405864 2275 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NFKB1P19838 ZNF404-202ENST00000587539 1851 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
NFKB1P19838 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NFKB1P19838 AL391987.6-201ENST00000305671 199 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 Y_RNA.324-201ENST00000365165 102 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 RNA5SP455-201ENST00000365190 119 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 RNU1-106P-201ENST00000384382 164 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 PCNPP3-201ENST00000393579 471 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 MIR1250-201ENST00000408098 113 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 Y_RNA.592-201ENST00000410274 109 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 RNU2-43P-201ENST00000410306 190 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 SSXP9-201ENST00000417503 292 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC5.09□□□□□ -1.59
NFKB1P19838 RPS26P47-201ENST00000427219 348 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC5.09□□□□□ -1.59
NFKB1P19838 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.09□□□□□ -1.59
NFKB1P19838 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NFKB1P19838 AL356981.1-201ENST00000454879 684 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 RPL23AP2-201ENST00000471227 466 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 RNA5SP43-201ENST00000516559 110 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC5.09□□□□□ -1.59
NFKB1P19838 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC5.09□□□□□ -1.59
NFKB1P19838 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC5.09□□□□□ -1.59
NFKB1P19838 MIR3691-201ENST00000578066 90 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 AC011447.4-201ENST00000587562 111 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC5.09□□□□□ -1.59
NFKB1P19838 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
NFKB1P19838 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
NFKB1P19838 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.09□□□□□ -1.59
NFKB1P19838 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC5.09□□□□□ -1.59
NFKB1P19838 SAGE2P-201ENST00000420011 2126 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 PRO1804-201ENST00000623780 2050 ntBASIC5.09□□□□□ -1.59
NFKB1P19838 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NFKB1P19838 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NFKB1P19838 SLC17A1-204ENST00000476801 1704 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.6
NFKB1P19838 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NFKB1P19838 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
NFKB1P19838 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC5.08□□□□□ -1.6
NFKB1P19838 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NFKB1P19838 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.08□□□□□ -1.6
NFKB1P19838 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NFKB1P19838 DDX18P3-201ENST00000404856 2007 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
NFKB1P19838 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
NFKB1P19838 AP000560.1-201ENST00000624150 1937 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 Y_RNA.464-201ENST00000384282 110 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 MIR548I2-201ENST00000408348 149 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5.08□□□□□ -1.6
NFKB1P19838 AC063979.1-201ENST00000415539 377 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 RPL23AP25-201ENST00000430973 463 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC5.08□□□□□ -1.6
NFKB1P19838 AL138752.1-201ENST00000452964 351 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AC005532.2-201ENST00000467154 373 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AC073073.1-201ENST00000493920 463 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 COX6B1P5-201ENST00000509843 249 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AL671862.1-201ENST00000515851 349 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 RNA5SP34-201ENST00000516887 130 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AC092490.3-201ENST00000545370 572 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC5.08□□□□□ -1.6
NFKB1P19838 AL121917.1-203ENST00000605534 577 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AC008962.1-201ENST00000605729 304 ntBASIC5.08□□□□□ -1.6
NFKB1P19838 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC5.08□□□□□ -1.6
NFKB1P19838 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
NFKB1P19838 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC5.08□□□□□ -1.6
NFKB1P19838 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
NFKB1P19838 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.08□□□□□ -1.6
NFKB1P19838 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
NFKB1P19838 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 AC139769.1-204ENST00000472297 1931 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.07□□□□□ -1.6
NFKB1P19838 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
NFKB1P19838 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NFKB1P19838 SNORA73.1-201ENST00000363107 205 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 U8.4-201ENST00000363626 134 ntBASIC5.07□□□□□ -1.6
NFKB1P19838 RNU6-263P-201ENST00000363811 107 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 167 ms