Protein–RNA interactions for Protein: Q96T60

PNKP, Bifunctional polynucleotide phosphatase/kinase, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNKPQ96T60 MTND1P9-201ENST00000453775 944 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 ST13P14-201ENST00000474095 734 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AL163973.1-201ENST00000484753 577 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PNKPQ96T60 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.15□□□□□ -1.75
PNKPQ96T60 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PNKPQ96T60 SNORD27.1-201ENST00000516319 72 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 HMGB1P41-201ENST00000520234 440 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AC243972.3-201ENST00000539655 198 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AC023050.3-201ENST00000541142 333 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC4.15□□□□□ -1.75
PNKPQ96T60 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.15□□□□□ -1.75
PNKPQ96T60 MIR4444-1-201ENST00000581696 74 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 MIR4444-2-201ENST00000584390 74 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.15□□□□□ -1.75
PNKPQ96T60 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.15□□□□□ -1.75
PNKPQ96T60 AP001429.1-201ENST00000602568 530 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AC110741.2-201ENST00000605278 268 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AC007742.2-201ENST00000618226 398 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 AC005858.4-201ENST00000623191 700 ntBASIC4.15□□□□□ -1.75
PNKPQ96T60 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
PNKPQ96T60 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.75
PNKPQ96T60 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
PNKPQ96T60 ACSM3-201ENST00000289416 2845 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PNKPQ96T60 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC006026.1-201ENST00000444025 1803 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PNKPQ96T60 RNU4-76P-201ENST00000364509 141 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 SNORD81.2-201ENST00000365153 76 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
PNKPQ96T60 RNU6-213P-201ENST00000384051 104 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 MIR200C-201ENST00000384980 68 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 RNU6-821P-201ENST00000390995 107 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AL590704.1-201ENST00000402856 794 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AL162578.1-201ENST00000406202 378 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 RNA5SP56-201ENST00000410277 118 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC008850.1-201ENST00000427546 362 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 RPS29P31-201ENST00000446147 164 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC073415.1-201ENST00000449240 153 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC034236.1-201ENST00000469891 373 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 RN7SL271P-201ENST00000487601 295 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC093278.1-201ENST00000494700 600 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC026427.2-201ENST00000506228 536 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 Y_RNA.675-201ENST00000516389 149 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.14□□□□□ -1.75
PNKPQ96T60 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC091516.1-201ENST00000549191 703 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC090877.1-201ENST00000561418 344 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AL355812.1-201ENST00000603215 216 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC105429.2-201ENST00000610567 517 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AC009233.1-201ENST00000616477 371 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AL136221.1-201ENST00000621449 509 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC244100.1-202ENST00000621554 382 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 CR392039.5-201ENST00000623201 510 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 AC090617.10-201ENST00000624308 134 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.14□□□□□ -1.75
PNKPQ96T60 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
PNKPQ96T60 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC4.14□□□□□ -1.75
PNKPQ96T60 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.14□□□□□ -1.75
PNKPQ96T60 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.14□□□□□ -1.75
PNKPQ96T60 OR4G1P-203ENST00000641984 1631 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PNKPQ96T60 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PNKPQ96T60 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PNKPQ96T60 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
PNKPQ96T60 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
PNKPQ96T60 RNU6-1011P-201ENST00000384668 107 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 MIR1251-201ENST00000408552 70 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 MIR1183-201ENST00000408856 89 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 RNU4-78P-201ENST00000410940 126 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 RNU6-516P-201ENST00000411381 104 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC4.13□□□□□ -1.75
PNKPQ96T60 AL451062.2-201ENST00000427515 271 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 OR2AS1P-201ENST00000427827 319 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AC018644.1-201ENST00000429934 551 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AL445584.1-201ENST00000431451 330 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.13□□□□□ -1.75
PNKPQ96T60 TAAR7P-201ENST00000436141 242 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 HMGB1P37-201ENST00000439613 609 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AC010655.1-201ENST00000449336 292 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.13□□□□□ -1.75
PNKPQ96T60 snoU109.4-201ENST00000458953 143 ntBASIC4.13□□□□□ -1.75
PNKPQ96T60 GMFBP1-201ENST00000467831 427 ntBASIC4.13□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 150.8 ms