Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
TMEM56-RWDD3S4R434 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 AC011767.1-201ENST00000617410 1153 ntBASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 AC073592.3-201ENST00000625118 1834 ntBASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 AP000997.3-201ENST00000623333 2250 ntBASIC15.63■□□□□ 0.09
TMEM56-RWDD3S4R434 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 ZNRF2P3-201ENST00000424200 374 ntBASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
TMEM56-RWDD3S4R434 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TMEM56-RWDD3S4R434 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms