Protein–RNA interactions for Protein: Q16394

EXT1, Exostosin-1, humanhuman

Predictions only

Length 746 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1Q16394 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXT1Q16394 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
EXT1Q16394 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EXT1Q16394 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
EXT1Q16394 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXT1Q16394 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXT1Q16394 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.67■□□□□ 0.42
EXT1Q16394 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
EXT1Q16394 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.66■□□□□ 0.42
EXT1Q16394 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
EXT1Q16394 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.66■□□□□ 0.42
EXT1Q16394 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.66■□□□□ 0.42
EXT1Q16394 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.66■□□□□ 0.42
EXT1Q16394 AL138966.2-201ENST00000621997 464 ntBASIC17.66■□□□□ 0.42
EXT1Q16394 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.66■□□□□ 0.42
EXT1Q16394 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
EXT1Q16394 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
EXT1Q16394 AC125437.2-201ENST00000625180 2167 ntBASIC17.66■□□□□ 0.42
EXT1Q16394 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.66■□□□□ 0.42
EXT1Q16394 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
EXT1Q16394 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
EXT1Q16394 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.65■□□□□ 0.42
EXT1Q16394 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.65■□□□□ 0.42
EXT1Q16394 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.65■□□□□ 0.42
EXT1Q16394 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.65■□□□□ 0.42
EXT1Q16394 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.65■□□□□ 0.42
EXT1Q16394 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.65■□□□□ 0.42
EXT1Q16394 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.65■□□□□ 0.42
EXT1Q16394 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.65■□□□□ 0.42
EXT1Q16394 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
EXT1Q16394 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
EXT1Q16394 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.64■□□□□ 0.41
EXT1Q16394 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.64■□□□□ 0.41
EXT1Q16394 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.64■□□□□ 0.41
EXT1Q16394 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 DUX4L26-201ENST00000489078 1255 ntBASIC17.64■□□□□ 0.41
EXT1Q16394 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.64■□□□□ 0.41
EXT1Q16394 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.64■□□□□ 0.41
EXT1Q16394 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.64■□□□□ 0.41
EXT1Q16394 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.64■□□□□ 0.41
EXT1Q16394 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
EXT1Q16394 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
EXT1Q16394 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.64■□□□□ 0.41
EXT1Q16394 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.64■□□□□ 0.41
EXT1Q16394 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
EXT1Q16394 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.64■□□□□ 0.41
EXT1Q16394 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
EXT1Q16394 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
EXT1Q16394 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms