Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Scn3bQ8BHK2 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Scn3bQ8BHK2 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
Scn3bQ8BHK2 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Scn3bQ8BHK2 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Scn3bQ8BHK2 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.52■■□□□ 1.04
Scn3bQ8BHK2 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Scn3bQ8BHK2 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Scn3bQ8BHK2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
Scn3bQ8BHK2 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn3bQ8BHK2 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Scn3bQ8BHK2 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Scn3bQ8BHK2 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn3bQ8BHK2 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn3bQ8BHK2 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
Scn3bQ8BHK2 Gm8109-201ENSMUST00000194076 746 ntBASIC21.47■■□□□ 1.03
Scn3bQ8BHK2 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
Scn3bQ8BHK2 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Scn3bQ8BHK2 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.46■■□□□ 1.03
Scn3bQ8BHK2 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn3bQ8BHK2 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Scn3bQ8BHK2 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Scn3bQ8BHK2 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
Scn3bQ8BHK2 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
Scn3bQ8BHK2 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Scn3bQ8BHK2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Scn3bQ8BHK2 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.43■■□□□ 1.02
Scn3bQ8BHK2 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.43■■□□□ 1.02
Scn3bQ8BHK2 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Scn3bQ8BHK2 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.43■■□□□ 1.02
Scn3bQ8BHK2 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
Scn3bQ8BHK2 Gm16148-201ENSMUST00000119653 893 ntBASIC21.42■■□□□ 1.02
Scn3bQ8BHK2 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Scn3bQ8BHK2 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
Scn3bQ8BHK2 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Scn3bQ8BHK2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
Scn3bQ8BHK2 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn3bQ8BHK2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn3bQ8BHK2 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Scn3bQ8BHK2 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC21.37■■□□□ 1.01
Scn3bQ8BHK2 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn3bQ8BHK2 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn3bQ8BHK2 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Scn3bQ8BHK2 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Scn3bQ8BHK2 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn3bQ8BHK2 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn3bQ8BHK2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn3bQ8BHK2 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn3bQ8BHK2 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Scn3bQ8BHK2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Scn3bQ8BHK2 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn3bQ8BHK2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Scn3bQ8BHK2 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn3bQ8BHK2 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn3bQ8BHK2 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
Scn3bQ8BHK2 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Scn3bQ8BHK2 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Scn3bQ8BHK2 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.33■■□□□ 1.01
Scn3bQ8BHK2 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.33■■□□□ 1.01
Scn3bQ8BHK2 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Scn3bQ8BHK2 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Scn3bQ8BHK2 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Scn3bQ8BHK2 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Scn3bQ8BHK2 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms