Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 MAS2YHR024C 1449 nt7.69□□□□□ -1.18
PDH1Q12428 INH1YDL181W 258 nt7.68□□□□□ -1.18
PDH1Q12428 MCP1YOR228C 909 nt7.68□□□□□ -1.18
PDH1Q12428 TPN1YGL186C 1740 nt7.68□□□□□ -1.18
PDH1Q12428 ARG7YMR062C 1326 nt7.68□□□□□ -1.18
PDH1Q12428 NPP2YEL016C 1482 nt7.68□□□□□ -1.18
PDH1Q12428 YEL023CYEL023C 2049 nt7.68□□□□□ -1.18
PDH1Q12428 LRO1YNR008W 1986 nt7.67□□□□□ -1.18
PDH1Q12428 RCF1YML030W 480 nt7.66□□□□□ -1.18
PDH1Q12428 PUS4YNL292W 1212 nt7.66□□□□□ -1.18
PDH1Q12428 UME1YPL139C 1383 nt7.66□□□□□ -1.18
PDH1Q12428 SPG1YGR236C 288 nt7.65□□□□□ -1.18
PDH1Q12428 AAD14YNL331C 1131 nt7.65□□□□□ -1.18
PDH1Q12428 YJR142WYJR142W 1029 nt7.64□□□□□ -1.19
PDH1Q12428 YPQ1YOL092W 927 nt7.64□□□□□ -1.19
PDH1Q12428 ERV2YPR037C 591 nt7.64□□□□□ -1.19
PDH1Q12428 MSI1YBR195C 1269 nt7.64□□□□□ -1.19
PDH1Q12428 CKI1YLR133W 1749 nt7.64□□□□□ -1.19
PDH1Q12428 HXK1YFR053C 1458 nt7.63□□□□□ -1.19
PDH1Q12428 NBA1YOL070C 1506 nt7.62□□□□□ -1.19
PDH1Q12428 NMA2YGR010W 1188 nt7.62□□□□□ -1.19
PDH1Q12428 AIM46YHR199C 933 nt7.62□□□□□ -1.19
PDH1Q12428 STS1YIR011C 960 nt7.62□□□□□ -1.19
PDH1Q12428 CYS3YAL012W 1185 nt7.62□□□□□ -1.19
PDH1Q12428 MAM3YOL060C 2121 nt7.62□□□□□ -1.19
PDH1Q12428 THI6YPL214C 1623 nt7.62□□□□□ -1.19
PDH1Q12428 YIL177CYIL177C 5277 nt7.62□□□□□ -1.19
PDH1Q12428 POR2YIL114C 846 nt7.61□□□□□ -1.19
PDH1Q12428 GCD11YER025W 1584 nt7.61□□□□□ -1.19
PDH1Q12428 FET5YFL041W 1869 nt7.61□□□□□ -1.19
PDH1Q12428 snR86snR86 1004 nt7.6□□□□□ -1.19
PDH1Q12428 ADH6YMR318C 1083 nt7.6□□□□□ -1.19
PDH1Q12428 CST26YBR042C 1194 nt7.6□□□□□ -1.19
PDH1Q12428 YPL067CYPL067C 597 nt7.6□□□□□ -1.19
PDH1Q12428 YGL081WYGL081W 963 nt7.59□□□□□ -1.19
PDH1Q12428 TES1YJR019C 1050 nt7.59□□□□□ -1.19
PDH1Q12428 YRF1-3YGR296W 5580 nt7.59□□□□□ -1.2
PDH1Q12428 YRF1-6YNL339C 5580 nt7.59□□□□□ -1.2
PDH1Q12428 YRF1-7YPL283C 5580 nt7.59□□□□□ -1.2
PDH1Q12428 YGR137WYGR137W 375 nt7.58□□□□□ -1.2
PDH1Q12428 ZIM17YNL310C 525 nt7.58□□□□□ -1.2
PDH1Q12428 LGE1YPL055C 999 nt7.58□□□□□ -1.2
PDH1Q12428 SPE3YPR069C 882 nt7.58□□□□□ -1.2
PDH1Q12428 AAT1YKL106W 1356 nt7.58□□□□□ -1.2
PDH1Q12428 MBF1YOR298C-A 456 nt7.57□□□□□ -1.2
PDH1Q12428 UBP13YBL067C 2244 nt7.57□□□□□ -1.2
PDH1Q12428 ALD5YER073W 1563 nt7.57□□□□□ -1.2
PDH1Q12428 CDC3YLR314C 1563 nt7.56□□□□□ -1.2
PDH1Q12428 RRP43YCR035C 1185 nt7.56□□□□□ -1.2
PDH1Q12428 STF1YDL130W-A 261 nt7.56□□□□□ -1.2
PDH1Q12428 TRR2YHR106W 1029 nt7.56□□□□□ -1.2
PDH1Q12428 WSC3YOL105C 1671 nt7.56□□□□□ -1.2
PDH1Q12428 PLB3YOL011W 2061 nt7.56□□□□□ -1.2
PDH1Q12428 MTO1YGL236C 2010 nt7.56□□□□□ -1.2
PDH1Q12428 CPR2YHR057C 618 nt7.55□□□□□ -1.2
PDH1Q12428 PRS4YBL068W 981 nt7.55□□□□□ -1.2
PDH1Q12428 TRP2YER090W 1524 nt7.55□□□□□ -1.2
PDH1Q12428 MNN9YPL050C 1188 nt7.54□□□□□ -1.2
PDH1Q12428 HRB1YNL004W 1365 nt7.54□□□□□ -1.2
PDH1Q12428 STE3YKL178C 1413 nt7.52□□□□□ -1.2
PDH1Q12428 DIP5YPL265W 1827 nt7.52□□□□□ -1.2
PDH1Q12428 PSA1YDL055C 1086 nt7.52□□□□□ -1.21
PDH1Q12428 YER152CYER152C 1332 nt7.52□□□□□ -1.21
PDH1Q12428 BUD31YCR063W 474 nt7.51□□□□□ -1.21
PDH1Q12428 NDE2YDL085W 1638 nt7.51□□□□□ -1.21
PDH1Q12428 DUR3YHL016C 2208 nt7.5□□□□□ -1.21
PDH1Q12428 ARO3YDR035W 1113 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)BtD(GUC)B 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)DtD(GUC)D 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)G1tD(GUC)G1 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)G2tD(GUC)G2 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)I1tD(GUC)I1 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)I2tD(GUC)I2 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)J1tD(GUC)J1 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)J2tD(GUC)J2 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)J3tD(GUC)J3 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)J4tD(GUC)J4 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)KtD(GUC)K 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)L1tD(GUC)L1 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)L2tD(GUC)L2 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)MtD(GUC)M 72 nt7.5□□□□□ -1.21
PDH1Q12428 tD(GUC)OtD(GUC)O 72 nt7.5□□□□□ -1.21
PDH1Q12428 OSM1YJR051W 1506 nt7.5□□□□□ -1.21
PDH1Q12428 YNL295WYNL295W 1575 nt7.5□□□□□ -1.21
PDH1Q12428 INO1YJL153C 1602 nt7.49□□□□□ -1.21
PDH1Q12428 INP54YOL065C 1155 nt7.49□□□□□ -1.21
PDH1Q12428 HXT11YOL156W 1704 nt7.49□□□□□ -1.21
PDH1Q12428 GAL83YER027C 1254 nt7.48□□□□□ -1.21
PDH1Q12428 TDA4YJR116W 840 nt7.48□□□□□ -1.21
PDH1Q12428 YOR072WYOR072W 315 nt7.48□□□□□ -1.21
PDH1Q12428 MPH3YJR160C 1809 nt7.48□□□□□ -1.21
PDH1Q12428 SNP1YIL061C 903 nt7.47□□□□□ -1.21
PDH1Q12428 SRM1YGL097W 1449 nt7.46□□□□□ -1.21
PDH1Q12428 PRY2YKR013W 990 nt7.46□□□□□ -1.22
PDH1Q12428 TIF3YPR163C 1311 nt7.46□□□□□ -1.22
PDH1Q12428 BIO3YNR058W 1443 nt7.45□□□□□ -1.22
PDH1Q12428 PMP3YDR276C 168 nt7.45□□□□□ -1.22
PDH1Q12428 PIL1YGR086C 1020 nt7.45□□□□□ -1.22
PDH1Q12428 YML034C-AYML034C-A 399 nt7.45□□□□□ -1.22
PDH1Q12428 ALG7YBR243C 1347 nt7.45□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms