Protein–RNA interactions for Protein: Q04673

SSL1, General transcription and DNA repair factor IIH subunit SSL1, yeastyeast

Predicted RBP Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSL1Q04673 YPL247CYPL247C 1572 nt7.74□□□□□ -1.17
SSL1Q04673 YEL023CYEL023C 2049 nt7.74□□□□□ -1.17
SSL1Q04673 ABP1YCR088W 1779 nt7.74□□□□□ -1.17
SSL1Q04673 tD(GUC)BtD(GUC)B 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)DtD(GUC)D 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)G1tD(GUC)G1 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)G2tD(GUC)G2 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)I1tD(GUC)I1 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)I2tD(GUC)I2 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)J1tD(GUC)J1 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)J2tD(GUC)J2 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)J3tD(GUC)J3 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)J4tD(GUC)J4 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)KtD(GUC)K 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)L1tD(GUC)L1 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)L2tD(GUC)L2 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)MtD(GUC)M 72 nt7.73□□□□□ -1.17
SSL1Q04673 tD(GUC)OtD(GUC)O 72 nt7.73□□□□□ -1.17
SSL1Q04673 THI73YLR004C 1572 nt7.72□□□□□ -1.17
SSL1Q04673 UTR5YEL035C 501 nt7.72□□□□□ -1.17
SSL1Q04673 MFT1YML062C 1179 nt7.72□□□□□ -1.17
SSL1Q04673 YPR084WYPR084W 1371 nt7.71□□□□□ -1.17
SSL1Q04673 BUD31YCR063W 474 nt7.71□□□□□ -1.18
SSL1Q04673 KAE1YKR038C 1161 nt7.71□□□□□ -1.18
SSL1Q04673 PRE5YMR314W 705 nt7.71□□□□□ -1.18
SSL1Q04673 ATP2YJR121W 1536 nt7.71□□□□□ -1.18
SSL1Q04673 RCF1YML030W 480 nt7.7□□□□□ -1.18
SSL1Q04673 DIP5YPL265W 1827 nt7.7□□□□□ -1.18
SSL1Q04673 ADA2YDR448W 1305 nt7.7□□□□□ -1.18
SSL1Q04673 HXT8YJL214W 1710 nt7.69□□□□□ -1.18
SSL1Q04673 INO1YJL153C 1602 nt7.68□□□□□ -1.18
SSL1Q04673 TIM50YPL063W 1431 nt7.68□□□□□ -1.18
SSL1Q04673 NDE2YDL085W 1638 nt7.67□□□□□ -1.18
SSL1Q04673 BAP3YDR046C 1815 nt7.67□□□□□ -1.18
SSL1Q04673 YHL030W-AYHL030W-A 462 nt7.67□□□□□ -1.18
SSL1Q04673 COX16YJL003W 357 nt7.67□□□□□ -1.18
SSL1Q04673 HBS1YKR084C 1836 nt7.66□□□□□ -1.18
SSL1Q04673 ARP10YDR106W 855 nt7.66□□□□□ -1.18
SSL1Q04673 AST1YBL069W 1290 nt7.66□□□□□ -1.18
SSL1Q04673 MIM1YOL026C 342 nt7.66□□□□□ -1.18
SSL1Q04673 MRP1YDR347W 966 nt7.65□□□□□ -1.18
SSL1Q04673 GLY1YEL046C 1164 nt7.65□□□□□ -1.18
SSL1Q04673 JHD1YER051W 1479 nt7.65□□□□□ -1.18
SSL1Q04673 TDA4YJR116W 840 nt7.65□□□□□ -1.18
SSL1Q04673 CBK1YNL161W 2271 nt7.65□□□□□ -1.18
SSL1Q04673 YOR072WYOR072W 315 nt7.65□□□□□ -1.18
SSL1Q04673 PRE10YOR362C 867 nt7.65□□□□□ -1.18
SSL1Q04673 HOS2YGL194C 1359 nt7.64□□□□□ -1.19
SSL1Q04673 GDH1YOR375C 1365 nt7.64□□□□□ -1.19
SSL1Q04673 PMU1YKL128C 888 nt7.64□□□□□ -1.19
SSL1Q04673 ORT1YOR130C 879 nt7.64□□□□□ -1.19
SSL1Q04673 WSC3YOL105C 1671 nt7.63□□□□□ -1.19
SSL1Q04673 TGL5YOR081C 2250 nt7.63□□□□□ -1.19
SSL1Q04673 ELP4YPL101W 1371 nt7.63□□□□□ -1.19
SSL1Q04673 TIF3YPR163C 1311 nt7.63□□□□□ -1.19
SSL1Q04673 SEM1YDR363W-A 270 nt7.63□□□□□ -1.19
SSL1Q04673 TAD2YJL035C 753 nt7.63□□□□□ -1.19
SSL1Q04673 MLS1YNL117W 1665 nt7.63□□□□□ -1.19
SSL1Q04673 SPG1YGR236C 288 nt7.62□□□□□ -1.19
SSL1Q04673 MRN1YPL184C 1839 nt7.62□□□□□ -1.19
SSL1Q04673 ALG7YBR243C 1347 nt7.61□□□□□ -1.19
SSL1Q04673 YJL045WYJL045W 1905 nt7.61□□□□□ -1.19
SSL1Q04673 INM1YHR046C 888 nt7.61□□□□□ -1.19
SSL1Q04673 YNL140CYNL140C 570 nt7.61□□□□□ -1.19
SSL1Q04673 PZF1YPR186C 1290 nt7.61□□□□□ -1.19
SSL1Q04673 WSC4YHL028W 1818 nt7.61□□□□□ -1.19
SSL1Q04673 ARO3YDR035W 1113 nt7.6□□□□□ -1.19
SSL1Q04673 YGR137WYGR137W 375 nt7.6□□□□□ -1.19
SSL1Q04673 YIL168WYIL168W 384 nt7.6□□□□□ -1.19
SSL1Q04673 TDH1YJL052W 999 nt7.6□□□□□ -1.19
SSL1Q04673 GUT1YHL032C 2130 nt7.58□□□□□ -1.2
SSL1Q04673 STF1YDL130W-A 261 nt7.58□□□□□ -1.2
SSL1Q04673 MRP7YNL005C 1116 nt7.57□□□□□ -1.2
SSL1Q04673 LPD1YFL018C 1500 nt7.57□□□□□ -1.2
SSL1Q04673 YJL107CYJL107C 1164 nt7.56□□□□□ -1.2
SSL1Q04673 YMR147WYMR147W 672 nt7.56□□□□□ -1.2
SSL1Q04673 ARG7YMR062C 1326 nt7.55□□□□□ -1.2
SSL1Q04673 APM1YPL259C 1428 nt7.55□□□□□ -1.2
SSL1Q04673 tL(UAA)B1tL(UAA)B1 84 nt7.55□□□□□ -1.2
SSL1Q04673 tL(UAA)B2tL(UAA)B2 84 nt7.55□□□□□ -1.2
SSL1Q04673 tL(UAA)DtL(UAA)D 84 nt7.55□□□□□ -1.2
SSL1Q04673 SUP51tL(UAA)J 84 nt7.55□□□□□ -1.2
SSL1Q04673 tL(UAA)KtL(UAA)K 84 nt7.55□□□□□ -1.2
SSL1Q04673 tL(UAA)LtL(UAA)L 84 nt7.55□□□□□ -1.2
SSL1Q04673 tL(UAA)NtL(UAA)N 84 nt7.55□□□□□ -1.2
SSL1Q04673 ADE1YAR015W 921 nt7.55□□□□□ -1.2
SSL1Q04673 SCO2YBR024W 906 nt7.55□□□□□ -1.2
SSL1Q04673 NUP53YMR153W 1428 nt7.53□□□□□ -1.2
SSL1Q04673 snR4snR4 186 nt7.53□□□□□ -1.2
SSL1Q04673 RSM23YGL129C 1353 nt7.53□□□□□ -1.2
SSL1Q04673 DIA4YHR011W 1341 nt7.52□□□□□ -1.2
SSL1Q04673 SNP1YIL061C 903 nt7.52□□□□□ -1.21
SSL1Q04673 HDA1YNL021W 2121 nt7.51□□□□□ -1.21
SSL1Q04673 KTR4YBR199W 1395 nt7.51□□□□□ -1.21
SSL1Q04673 MGM101YJR144W 810 nt7.51□□□□□ -1.21
SSL1Q04673 COS10YNR075W 1125 nt7.51□□□□□ -1.21
SSL1Q04673 PSP2YML017W 1782 nt7.51□□□□□ -1.21
SSL1Q04673 MEX67YPL169C 1800 nt7.5□□□□□ -1.21
SSL1Q04673 SKG1YKR100C 1068 nt7.5□□□□□ -1.21
SSL1Q04673 ECM27YJR106W 2178 nt7.5□□□□□ -1.21
Retrieved 100 of 7,029 protein–RNA pairs in 22.9 ms