Protein–RNA interactions for Protein: Q04487

SHH3, Mitochondrial inner membrane protein SHH3, yeastyeast

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHH3Q04487 PAU5YFL020C 369 nt6.36□□□□□ -1.39
SHH3Q04487 STP3YLR375W 1032 nt6.36□□□□□ -1.39
SHH3Q04487 HSM3YBR272C 1443 nt6.35□□□□□ -1.39
SHH3Q04487 PMT1YDL095W 2454 nt6.35□□□□□ -1.39
SHH3Q04487 YLR280CYLR280C 351 nt6.35□□□□□ -1.39
SHH3Q04487 SMC5YOL034W 3282 nt6.35□□□□□ -1.39
SHH3Q04487 RSC9YML127W 1746 nt6.35□□□□□ -1.39
SHH3Q04487 tA(AGC)DtA(AGC)D 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)FtA(AGC)F 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)GtA(AGC)G 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)HtA(AGC)H 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)JtA(AGC)J 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)K1tA(AGC)K1 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)K2tA(AGC)K2 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)LtA(AGC)L 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)M1tA(AGC)M1 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)M2tA(AGC)M2 73 nt6.34□□□□□ -1.39
SHH3Q04487 tA(AGC)PtA(AGC)P 73 nt6.34□□□□□ -1.39
SHH3Q04487 CYC3YAL039C 810 nt6.34□□□□□ -1.39
SHH3Q04487 OCH1YGL038C 1443 nt6.33□□□□□ -1.4
SHH3Q04487 PUP3YER094C 618 nt6.33□□□□□ -1.4
SHH3Q04487 PGC1YPL206C 966 nt6.33□□□□□ -1.4
SHH3Q04487 RHO1YPR165W 630 nt6.33□□□□□ -1.4
SHH3Q04487 SEC24YIL109C 2781 nt6.33□□□□□ -1.4
SHH3Q04487 CKB1YGL019W 837 nt6.32□□□□□ -1.4
SHH3Q04487 IPL1YPL209C 1104 nt6.32□□□□□ -1.4
SHH3Q04487 TOD6YBL054W 1578 nt6.31□□□□□ -1.4
SHH3Q04487 PPZ2YDR436W 2133 nt6.31□□□□□ -1.4
SHH3Q04487 ADH7YCR105W 1086 nt6.31□□□□□ -1.4
SHH3Q04487 YHL030W-AYHL030W-A 462 nt6.31□□□□□ -1.4
SHH3Q04487 ELP6YMR312W 822 nt6.31□□□□□ -1.4
SHH3Q04487 RFS1YBR052C 633 nt6.31□□□□□ -1.4
SHH3Q04487 ECM30YLR436C 3825 nt6.31□□□□□ -1.4
SHH3Q04487 ERG12YMR208W 1332 nt6.3□□□□□ -1.4
SHH3Q04487 ERO1YML130C 1692 nt6.3□□□□□ -1.4
SHH3Q04487 TES1YJR019C 1050 nt6.3□□□□□ -1.4
SHH3Q04487 CDA1YLR307W 906 nt6.3□□□□□ -1.4
SHH3Q04487 YNR001W-AYNR001W-A 219 nt6.3□□□□□ -1.4
SHH3Q04487 TPO1YLL028W 1761 nt6.3□□□□□ -1.4
SHH3Q04487 AVL9YLR114C 2295 nt6.3□□□□□ -1.4
SHH3Q04487 HXT8YJL214W 1710 nt6.3□□□□□ -1.4
SHH3Q04487 SHC1YER096W 1539 nt6.3□□□□□ -1.4
SHH3Q04487 PDC5YLR134W 1692 nt6.3□□□□□ -1.4
SHH3Q04487 PEX28YHR150W 1740 nt6.29□□□□□ -1.4
SHH3Q04487 SNP1YIL061C 903 nt6.29□□□□□ -1.4
SHH3Q04487 YMR166CYMR166C 1107 nt6.29□□□□□ -1.4
SHH3Q04487 SRF1YDL133W 1314 nt6.28□□□□□ -1.4
SHH3Q04487 THI73YLR004C 1572 nt6.28□□□□□ -1.4
SHH3Q04487 CAK1YFL029C 1107 nt6.28□□□□□ -1.4
SHH3Q04487 RUP1YOR138C 2016 nt6.28□□□□□ -1.4
SHH3Q04487 MTC6YHR151C 1581 nt6.27□□□□□ -1.41
SHH3Q04487 PAU15YIR041W 375 nt6.27□□□□□ -1.41
SHH3Q04487 MEU1YLR017W 1014 nt6.27□□□□□ -1.41
SHH3Q04487 YBR232CYBR232C 360 nt6.27□□□□□ -1.41
SHH3Q04487 YJL045WYJL045W 1905 nt6.27□□□□□ -1.41
SHH3Q04487 RMD8YFR048W 1989 nt6.25□□□□□ -1.41
SHH3Q04487 PRP2YNR011C 2631 nt6.25□□□□□ -1.41
SHH3Q04487 MAL31YBR298C 1845 nt6.25□□□□□ -1.41
SHH3Q04487 RAD51YER095W 1203 nt6.24□□□□□ -1.41
SHH3Q04487 RRT14YIL127C 621 nt6.24□□□□□ -1.41
SHH3Q04487 PRE10YOR362C 867 nt6.24□□□□□ -1.41
SHH3Q04487 YPT31YER031C 672 nt6.23□□□□□ -1.41
SHH3Q04487 ADE17YMR120C 1779 nt6.23□□□□□ -1.41
SHH3Q04487 SKY1YMR216C 2229 nt6.22□□□□□ -1.41
SHH3Q04487 SER2YGR208W 930 nt6.22□□□□□ -1.41
SHH3Q04487 TIM50YPL063W 1431 nt6.22□□□□□ -1.41
SHH3Q04487 YCR025CYCR025C 411 nt6.21□□□□□ -1.42
SHH3Q04487 YGR210CYGR210C 1236 nt6.21□□□□□ -1.42
SHH3Q04487 tS(GCU)LtS(GCU)L 80 nt6.21□□□□□ -1.42
SHH3Q04487 RQC1YDR333C 2172 nt6.21□□□□□ -1.42
SHH3Q04487 SGE1YPR198W 1632 nt6.21□□□□□ -1.42
SHH3Q04487 CRN1YLR429W 1956 nt6.2□□□□□ -1.42
SHH3Q04487 NMD5YJR132W 3147 nt6.2□□□□□ -1.42
SHH3Q04487 YER152W-AYER152W-A 567 nt6.2□□□□□ -1.42
SHH3Q04487 GNA1YFL017C 480 nt6.2□□□□□ -1.42
SHH3Q04487 SNA3YJL151C 402 nt6.2□□□□□ -1.42
SHH3Q04487 LSP1YPL004C 1026 nt6.2□□□□□ -1.42
SHH3Q04487 HTS1YPR033C 1641 nt6.2□□□□□ -1.42
SHH3Q04487 EMP65YER140W 1671 nt6.2□□□□□ -1.42
SHH3Q04487 RSP5YER125W 2430 nt6.19□□□□□ -1.42
SHH3Q04487 HAM1YJR069C 594 nt6.19□□□□□ -1.42
SHH3Q04487 YPL108WYPL108W 507 nt6.19□□□□□ -1.42
SHH3Q04487 AOS1YPR180W 1044 nt6.19□□□□□ -1.42
SHH3Q04487 ARG7YMR062C 1326 nt6.19□□□□□ -1.42
SHH3Q04487 LEO1YOR123C 1395 nt6.18□□□□□ -1.42
SHH3Q04487 PMU1YKL128C 888 nt6.18□□□□□ -1.42
SHH3Q04487 SNF7YLR025W 723 nt6.18□□□□□ -1.42
SHH3Q04487 YBL113CYBL113C 2379 nt6.17□□□□□ -1.42
SHH3Q04487 JHD1YER051W 1479 nt6.17□□□□□ -1.42
SHH3Q04487 DST1YGL043W 930 nt6.17□□□□□ -1.42
SHH3Q04487 PET10YKR046C 852 nt6.17□□□□□ -1.42
SHH3Q04487 MNN9YPL050C 1188 nt6.17□□□□□ -1.42
SHH3Q04487 VMA2YBR127C 1554 nt6.16□□□□□ -1.42
SHH3Q04487 YHR033WYHR033W 1272 nt6.16□□□□□ -1.42
SHH3Q04487 YOR041CYOR041C 432 nt6.16□□□□□ -1.42
SHH3Q04487 SEC23YPR181C 2307 nt6.16□□□□□ -1.42
SHH3Q04487 CLN1YMR199W 1641 nt6.15□□□□□ -1.42
SHH3Q04487 NAP1YKR048C 1254 nt6.15□□□□□ -1.42
SHH3Q04487 DCR2YLR361C 1737 nt6.14□□□□□ -1.43
SHH3Q04487 TGA1tA(UGC)A 73 nt6.14□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms