Protein–RNA interactions for Protein: P39962

YCK3, Casein kinase I homolog 3, yeastyeast

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YCK3P39962 BIG1YHR101C 1008 nt12.73□□□□□ -0.37
YCK3P39962 SNF8YPL002C 702 nt12.73□□□□□ -0.37
YCK3P39962 ECM13YBL043W 774 nt12.72□□□□□ -0.37
YCK3P39962 YNL146WYNL146W 303 nt12.72□□□□□ -0.37
YCK3P39962 YDC1YPL087W 954 nt12.72□□□□□ -0.37
YCK3P39962 YPR012WYPR012W 255 nt12.72□□□□□ -0.37
YCK3P39962 YPR170W-AYPR170W-A 186 nt12.72□□□□□ -0.37
YCK3P39962 PEX3YDR329C 1326 nt12.71□□□□□ -0.37
YCK3P39962 SPT3YDR392W 1014 nt12.71□□□□□ -0.37
YCK3P39962 YFR032C-BYFR032C-B 264 nt12.71□□□□□ -0.37
YCK3P39962 HOP2YGL033W 657 nt12.71□□□□□ -0.37
YCK3P39962 ATS1YAL020C 1002 nt12.71□□□□□ -0.37
YCK3P39962 DBR1YKL149C 1218 nt12.71□□□□□ -0.37
YCK3P39962 RPL10YLR075W 666 nt12.71□□□□□ -0.37
YCK3P39962 BUD22YMR014W 1560 nt12.7□□□□□ -0.38
YCK3P39962 PET122YER153C 765 nt12.7□□□□□ -0.38
YCK3P39962 MRP49YKL167C 414 nt12.7□□□□□ -0.38
YCK3P39962 YKL183C-AYKL183C-A 213 nt12.7□□□□□ -0.38
YCK3P39962 SRL2YLR082C 1179 nt12.7□□□□□ -0.38
YCK3P39962 REC102YLR329W 795 nt12.7□□□□□ -0.38
YCK3P39962 YMR193C-AYMR193C-A 387 nt12.7□□□□□ -0.38
YCK3P39962 DRN1YGR093W 1524 nt12.69□□□□□ -0.38
YCK3P39962 RAM1YDL090C 1296 nt12.69□□□□□ -0.38
YCK3P39962 MRP13YGR084C 1020 nt12.69□□□□□ -0.38
YCK3P39962 YDR161WYDR161W 1164 nt12.68□□□□□ -0.38
YCK3P39962 EAF5YEL018W 840 nt12.68□□□□□ -0.38
YCK3P39962 SPO74YGL170C 1242 nt12.68□□□□□ -0.38
YCK3P39962 HMX1YLR205C 954 nt12.68□□□□□ -0.38
YCK3P39962 YTH1YPR107C 627 nt12.68□□□□□ -0.38
YCK3P39962 CDS1YBR029C 1374 nt12.68□□□□□ -0.38
YCK3P39962 YBL005W-AYBL005W-A 1323 nt12.67□□□□□ -0.38
YCK3P39962 YMR046CYMR046C 1323 nt12.67□□□□□ -0.38
YCK3P39962 SHU2YDR078C 672 nt12.67□□□□□ -0.38
YCK3P39962 YDR249CYDR249C 1122 nt12.67□□□□□ -0.38
YCK3P39962 YDR290WYDR290W 330 nt12.67□□□□□ -0.38
YCK3P39962 ADH4YGL256W 1149 nt12.67□□□□□ -0.38
YCK3P39962 HMLALPHA2YCL067C 633 nt12.66□□□□□ -0.38
YCK3P39962 MATALPHA2YCR039C 633 nt12.66□□□□□ -0.38
YCK3P39962 HVG1YER039C 750 nt12.66□□□□□ -0.38
YCK3P39962 YLR406C-AYLR406C-A 150 nt12.66□□□□□ -0.38
YCK3P39962 SPC24YMR117C 642 nt12.66□□□□□ -0.38
YCK3P39962 YPR145C-AYPR145C-A 237 nt12.66□□□□□ -0.38
YCK3P39962 SIR2YDL042C 1689 nt12.65□□□□□ -0.38
YCK3P39962 FCF1YDR339C 570 nt12.65□□□□□ -0.38
YCK3P39962 MRP1YDR347W 966 nt12.65□□□□□ -0.38
YCK3P39962 DCN1YLR128W 810 nt12.65□□□□□ -0.38
YCK3P39962 RSC58YLR033W 1509 nt12.65□□□□□ -0.38
YCK3P39962 CLG1YGL215W 1359 nt12.65□□□□□ -0.38
YCK3P39962 tP(UGG)O3tP(UGG)O3 72 nt12.64□□□□□ -0.39
YCK3P39962 EST3YIL009C-A 546 nt12.64□□□□□ -0.39
YCK3P39962 YJR115WYJR115W 510 nt12.64□□□□□ -0.39
YCK3P39962 URN1YPR152C 1398 nt12.64□□□□□ -0.39
YCK3P39962 AGE1YDR524C 1449 nt12.63□□□□□ -0.39
YCK3P39962 PRE1YER012W 597 nt12.63□□□□□ -0.39
YCK3P39962 ROT1YMR200W 771 nt12.63□□□□□ -0.39
YCK3P39962 NMT1YLR195C 1368 nt12.63□□□□□ -0.39
YCK3P39962 MEK1YOR351C 1494 nt12.63□□□□□ -0.39
YCK3P39962 ORC5YNL261W 1440 nt12.62□□□□□ -0.39
YCK3P39962 YPT6YLR262C 648 nt12.62□□□□□ -0.39
YCK3P39962 TRI1YMR233W 681 nt12.62□□□□□ -0.39
YCK3P39962 SLD7YOR060C 774 nt12.62□□□□□ -0.39
YCK3P39962 PRE2YPR103W 864 nt12.62□□□□□ -0.39
YCK3P39962 GCD10YNL062C 1437 nt12.62□□□□□ -0.39
YCK3P39962 YGL218WYGL218W 651 nt12.61□□□□□ -0.39
YCK3P39962 AIM25YJR100C 984 nt12.61□□□□□ -0.39
YCK3P39962 YNL296WYNL296W 315 nt12.61□□□□□ -0.39
YCK3P39962 PWR1PWR1 941 nt12.61□□□□□ -0.39
YCK3P39962 SHR3YDL212W 633 nt12.6□□□□□ -0.39
YCK3P39962 NSA2YER126C 786 nt12.6□□□□□ -0.39
YCK3P39962 YSC83YHR017W 1158 nt12.6□□□□□ -0.39
YCK3P39962 YIL020C-AYIL020C-A 339 nt12.6□□□□□ -0.39
YCK3P39962 YLR365WYLR365W 333 nt12.6□□□□□ -0.39
YCK3P39962 YOL050CYOL050C 321 nt12.6□□□□□ -0.39
YCK3P39962 CMK1YFR014C 1341 nt12.6□□□□□ -0.39
YCK3P39962 EHT1YBR177C 1356 nt12.59□□□□□ -0.39
YCK3P39962 RHB1YCR027C 630 nt12.59□□□□□ -0.39
YCK3P39962 snR85snR85 171 nt12.59□□□□□ -0.39
YCK3P39962 MSP1YGR028W 1089 nt12.59□□□□□ -0.39
YCK3P39962 CNS1YBR155W 1158 nt12.59□□□□□ -0.39
YCK3P39962 YAL064WYAL064W 285 nt12.58□□□□□ -0.4
YCK3P39962 PML39YML107C 1005 nt12.58□□□□□ -0.4
YCK3P39962 RFC4YOL094C 972 nt12.58□□□□□ -0.4
YCK3P39962 WHI2YOR043W 1461 nt12.58□□□□□ -0.4
YCK3P39962 MTF2YDL044C 1323 nt12.58□□□□□ -0.4
YCK3P39962 SDH3YKL141W 597 nt12.57□□□□□ -0.4
YCK3P39962 HYM1YKL189W 1200 nt12.57□□□□□ -0.4
YCK3P39962 ATG19YOL082W 1248 nt12.57□□□□□ -0.4
YCK3P39962 YNR061CYNR061C 660 nt12.56□□□□□ -0.4
YCK3P39962 AI4Q0065 1671 nt12.56□□□□□ -0.4
YCK3P39962 YIL092WYIL092W 1902 nt12.56□□□□□ -0.4
YCK3P39962 BCS1YDR375C 1371 nt12.56□□□□□ -0.4
YCK3P39962 MDM31YHR194W 1740 nt12.55□□□□□ -0.4
YCK3P39962 YCR041WYCR041W 333 nt12.55□□□□□ -0.4
YCK3P39962 HEM3YDL205C 984 nt12.55□□□□□ -0.4
YCK3P39962 YFL012WYFL012W 447 nt12.55□□□□□ -0.4
YCK3P39962 PRM5YIL117C 957 nt12.55□□□□□ -0.4
YCK3P39962 YJL047C-AYJL047C-A 135 nt12.55□□□□□ -0.4
YCK3P39962 MCM22YJR135C 720 nt12.55□□□□□ -0.4
YCK3P39962 MIA40YKL195W 1212 nt12.55□□□□□ -0.4
YCK3P39962 POM33YLL023C 840 nt12.55□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 40.4 ms