Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 MDH2YOL126C 1134 nt7.73□□□□□ -1.17
RPH1P39956 NME1NME1 340 nt7.73□□□□□ -1.17
RPH1P39956 EHT1YBR177C 1356 nt7.72□□□□□ -1.17
RPH1P39956 KAE1YKR038C 1161 nt7.71□□□□□ -1.18
RPH1P39956 JHD1YER051W 1479 nt7.7□□□□□ -1.18
RPH1P39956 SLM3YDL033C 1254 nt7.7□□□□□ -1.18
RPH1P39956 YJL043WYJL043W 774 nt7.7□□□□□ -1.18
RPH1P39956 ADE1YAR015W 921 nt7.7□□□□□ -1.18
RPH1P39956 NDE2YDL085W 1638 nt7.7□□□□□ -1.18
RPH1P39956 YGR137WYGR137W 375 nt7.69□□□□□ -1.18
RPH1P39956 RCF1YML030W 480 nt7.69□□□□□ -1.18
RPH1P39956 INO1YJL153C 1602 nt7.69□□□□□ -1.18
RPH1P39956 LRO1YNR008W 1986 nt7.69□□□□□ -1.18
RPH1P39956 TIM50YPL063W 1431 nt7.69□□□□□ -1.18
RPH1P39956 AFG2YLR397C 2343 nt7.68□□□□□ -1.18
RPH1P39956 ATP10YLR393W 840 nt7.67□□□□□ -1.18
RPH1P39956 YOR268CYOR268C 399 nt7.67□□□□□ -1.18
RPH1P39956 NUP53YMR153W 1428 nt7.67□□□□□ -1.18
RPH1P39956 HXT8YJL214W 1710 nt7.66□□□□□ -1.18
RPH1P39956 PMT7YDR307W 1989 nt7.66□□□□□ -1.18
RPH1P39956 GNP1YDR508C 1992 nt7.66□□□□□ -1.18
RPH1P39956 DIA4YHR011W 1341 nt7.65□□□□□ -1.18
RPH1P39956 SPE4YLR146C 903 nt7.65□□□□□ -1.18
RPH1P39956 HIS3YOR202W 663 nt7.65□□□□□ -1.18
RPH1P39956 PET494YNR045W 1470 nt7.64□□□□□ -1.19
RPH1P39956 BUD31YCR063W 474 nt7.64□□□□□ -1.19
RPH1P39956 WSC3YOL105C 1671 nt7.63□□□□□ -1.19
RPH1P39956 YIL108WYIL108W 2091 nt7.63□□□□□ -1.19
RPH1P39956 FUS3YBL016W 1062 nt7.63□□□□□ -1.19
RPH1P39956 ATO2YNR002C 849 nt7.63□□□□□ -1.19
RPH1P39956 LEA1YPL213W 717 nt7.63□□□□□ -1.19
RPH1P39956 YPL264CYPL264C 1062 nt7.63□□□□□ -1.19
RPH1P39956 YLR072WYLR072W 2082 nt7.63□□□□□ -1.19
RPH1P39956 PSP2YML017W 1782 nt7.62□□□□□ -1.19
RPH1P39956 YDR476CYDR476C 675 nt7.62□□□□□ -1.19
RPH1P39956 TDA4YJR116W 840 nt7.62□□□□□ -1.19
RPH1P39956 YMR253CYMR253C 1245 nt7.62□□□□□ -1.19
RPH1P39956 CCR4YAL021C 2514 nt7.62□□□□□ -1.19
RPH1P39956 EDC2YER035W 438 nt7.61□□□□□ -1.19
RPH1P39956 ARG7YMR062C 1326 nt7.6□□□□□ -1.19
RPH1P39956 TGL5YOR081C 2250 nt7.59□□□□□ -1.19
RPH1P39956 ERR3YMR323W 1314 nt7.59□□□□□ -1.19
RPH1P39956 ERR1YOR393W 1314 nt7.59□□□□□ -1.19
RPH1P39956 ERR2YPL281C 1314 nt7.59□□□□□ -1.19
RPH1P39956 ADE2YOR128C 1716 nt7.59□□□□□ -1.19
RPH1P39956 MNN9YPL050C 1188 nt7.59□□□□□ -1.19
RPH1P39956 YRF1-3YGR296W 5580 nt7.58□□□□□ -1.2
RPH1P39956 YRF1-6YNL339C 5580 nt7.58□□□□□ -1.2
RPH1P39956 YRF1-7YPL283C 5580 nt7.58□□□□□ -1.2
RPH1P39956 HAC1YFL031W 717 nt7.58□□□□□ -1.2
RPH1P39956 DIP5YPL265W 1827 nt7.57□□□□□ -1.2
RPH1P39956 SPR1YOR190W 1338 nt7.57□□□□□ -1.2
RPH1P39956 ABP1YCR088W 1779 nt7.57□□□□□ -1.2
RPH1P39956 RRT6YGL146C 936 nt7.57□□□□□ -1.2
RPH1P39956 INM1YHR046C 888 nt7.57□□□□□ -1.2
RPH1P39956 APT1YML022W 564 nt7.57□□□□□ -1.2
RPH1P39956 MRP7YNL005C 1116 nt7.57□□□□□ -1.2
RPH1P39956 YNL140CYNL140C 570 nt7.57□□□□□ -1.2
RPH1P39956 PNS1YOR161C 1620 nt7.56□□□□□ -1.2
RPH1P39956 MAS2YHR024C 1449 nt7.56□□□□□ -1.2
RPH1P39956 GLY1YEL046C 1164 nt7.56□□□□□ -1.2
RPH1P39956 CPT1YNL130C 1182 nt7.56□□□□□ -1.2
RPH1P39956 YRF1-1YDR545W 5391 nt7.56□□□□□ -1.2
RPH1P39956 YRF1-5YLR467W 5391 nt7.56□□□□□ -1.2
RPH1P39956 YRF1-8YOR396W 5391 nt7.56□□□□□ -1.2
RPH1P39956 TIF3YPR163C 1311 nt7.55□□□□□ -1.2
RPH1P39956 ARO3YDR035W 1113 nt7.55□□□□□ -1.2
RPH1P39956 SNP1YIL061C 903 nt7.55□□□□□ -1.2
RPH1P39956 SNU66YOR308C 1764 nt7.54□□□□□ -1.2
RPH1P39956 YDR306CYDR306C 1437 nt7.53□□□□□ -1.2
RPH1P39956 YIL177CYIL177C 5277 nt7.53□□□□□ -1.2
RPH1P39956 MAM3YOL060C 2121 nt7.53□□□□□ -1.2
RPH1P39956 YNL040WYNL040W 1371 nt7.53□□□□□ -1.2
RPH1P39956 ALG7YBR243C 1347 nt7.52□□□□□ -1.2
RPH1P39956 YLR358CYLR358C 564 nt7.52□□□□□ -1.21
RPH1P39956 PRE5YMR314W 705 nt7.52□□□□□ -1.21
RPH1P39956 BAP3YDR046C 1815 nt7.52□□□□□ -1.21
RPH1P39956 YER152CYER152C 1332 nt7.52□□□□□ -1.21
RPH1P39956 MRN1YPL184C 1839 nt7.51□□□□□ -1.21
RPH1P39956 SDH8YBR269C 417 nt7.51□□□□□ -1.21
RPH1P39956 HXT9YJL219W 1704 nt7.51□□□□□ -1.21
RPH1P39956 AQR1YNL065W 1761 nt7.51□□□□□ -1.21
RPH1P39956 MFG1YDL233W 1377 nt7.49□□□□□ -1.21
RPH1P39956 MSB3YNL293W 1902 nt7.48□□□□□ -1.21
RPH1P39956 WSC4YHL028W 1818 nt7.48□□□□□ -1.21
RPH1P39956 HXT13YEL069C 1695 nt7.47□□□□□ -1.21
RPH1P39956 POB3YML069W 1659 nt7.47□□□□□ -1.21
RPH1P39956 KTR4YBR199W 1395 nt7.46□□□□□ -1.21
RPH1P39956 DST1YGL043W 930 nt7.46□□□□□ -1.22
RPH1P39956 NCA3YJL116C 1014 nt7.46□□□□□ -1.22
RPH1P39956 MTC6YHR151C 1581 nt7.46□□□□□ -1.22
RPH1P39956 CPR2YHR057C 618 nt7.44□□□□□ -1.22
RPH1P39956 YML034C-AYML034C-A 399 nt7.44□□□□□ -1.22
RPH1P39956 STS1YIR011C 960 nt7.43□□□□□ -1.22
RPH1P39956 TES1YJR019C 1050 nt7.43□□□□□ -1.22
RPH1P39956 ERV2YPR037C 591 nt7.43□□□□□ -1.22
RPH1P39956 CDC13YDL220C 2775 nt7.43□□□□□ -1.22
RPH1P39956 YML079WYML079W 606 nt7.42□□□□□ -1.22
RPH1P39956 HOG1YLR113W 1308 nt7.42□□□□□ -1.22
RPH1P39956 STE3YKL178C 1413 nt7.42□□□□□ -1.22
Retrieved 100 of 7,029 protein–RNA pairs in 15.5 ms