Protein–RNA interactions for Protein: P32588

PUB1, Nuclear and cytoplasmic polyadenylated RNA-binding protein PUB1, yeastyeast

Known RBP RIP-Chip data

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUB1P32588 MCT1YOR221C 1083 nt7.45□□□□□ -1.22 RIP-Chip
PUB1P32588 snR189snR189 189 nt7.45□□□□□ -1.22
PUB1P32588 PAU19YMR325W 375 nt7.44□□□□□ -1.22
PUB1P32588 IRC14YOR135C 342 nt7.44□□□□□ -1.22
PUB1P32588 YLR169WYLR169W 354 nt7.43□□□□□ -1.22
PUB1P32588 NMD4YLR363C 657 nt7.43□□□□□ -1.22
PUB1P32588 MIX17YMR002W 471 nt7.43□□□□□ -1.22
PUB1P32588 DSE3YOR264W 1293 nt7.43□□□□□ -1.22
PUB1P32588 TMS1YDR105C 1422 nt7.43□□□□□ -1.22 RIP-Chip
PUB1P32588 NUR1YDL089W 1455 nt7.43□□□□□ -1.22
PUB1P32588 CWC25YNL245C 540 nt7.42□□□□□ -1.22 RIP-Chip
PUB1P32588 YPT11YNL304W 1254 nt7.42□□□□□ -1.22 RIP-Chip
PUB1P32588 KRE1YNL322C 942 nt7.42□□□□□ -1.22
PUB1P32588 SPE2YOL052C 1191 nt7.42□□□□□ -1.22
PUB1P32588 LEA1YPL213W 717 nt7.42□□□□□ -1.22
PUB1P32588 PZF1YPR186C 1290 nt7.42□□□□□ -1.22 RIP-Chip
PUB1P32588 HAS1YMR290C 1518 nt7.42□□□□□ -1.22 RIP-Chip
PUB1P32588 NAS6YGR232W 687 nt7.41□□□□□ -1.22
PUB1P32588 YJL009WYJL009W 327 nt7.41□□□□□ -1.22
PUB1P32588 YLR460CYLR460C 1131 nt7.41□□□□□ -1.22
PUB1P32588 IDI1YPL117C 867 nt7.41□□□□□ -1.22 RIP-Chip
PUB1P32588 BUD16YEL029C 939 nt7.4□□□□□ -1.22 RIP-Chip
PUB1P32588 DUS3YLR401C 2007 nt7.39□□□□□ -1.23
PUB1P32588 ADE16YLR028C 1776 nt7.39□□□□□ -1.23
PUB1P32588 APS2YJR058C 444 nt7.39□□□□□ -1.23
PUB1P32588 PEX22YAL055W 543 nt7.39□□□□□ -1.23
PUB1P32588 GSF2YML048W 1212 nt7.39□□□□□ -1.23 RIP-Chip
PUB1P32588 SLG1YOR008C 1137 nt7.39□□□□□ -1.23 RIP-Chip
PUB1P32588 DIA4YHR011W 1341 nt7.38□□□□□ -1.23
PUB1P32588 HAT2YEL056W 1206 nt7.38□□□□□ -1.23
PUB1P32588 NIF3YGL221C 867 nt7.38□□□□□ -1.23
PUB1P32588 YKR104WYKR104W 921 nt7.38□□□□□ -1.23
PUB1P32588 ERG29YMR134W 714 nt7.38□□□□□ -1.23
PUB1P32588 TUB4YLR212C 1422 nt7.37□□□□□ -1.23
PUB1P32588 POP2YNR052C 1302 nt7.37□□□□□ -1.23 RIP-Chip
PUB1P32588 YHR022CYHR022C 771 nt7.37□□□□□ -1.23
PUB1P32588 ARC35YNR035C 1029 nt7.37□□□□□ -1.23
PUB1P32588 VAM3YOR106W 852 nt7.37□□□□□ -1.23
PUB1P32588 HIS3YOR202W 663 nt7.37□□□□□ -1.23
PUB1P32588 PRE2YPR103W 864 nt7.37□□□□□ -1.23
PUB1P32588 FIT1YDR534C 1587 nt7.37□□□□□ -1.23
PUB1P32588 ABP1YCR088W 1779 nt7.36□□□□□ -1.23
PUB1P32588 PAR32YDL173W 888 nt7.36□□□□□ -1.23
PUB1P32588 PTC7YHR076W 1032 nt7.36□□□□□ -1.23
PUB1P32588 SVF1YDR346C 1446 nt7.35□□□□□ -1.23
PUB1P32588 ALG7YBR243C 1347 nt7.35□□□□□ -1.23 RIP-Chip
PUB1P32588 UFD1YGR048W 1086 nt7.35□□□□□ -1.23
PUB1P32588 FSH2YMR222C 672 nt7.35□□□□□ -1.23
PUB1P32588 YIL092WYIL092W 1902 nt7.35□□□□□ -1.23
PUB1P32588 YKR012CYKR012C 378 nt7.34□□□□□ -1.23
PUB1P32588 HAT1YPL001W 1125 nt7.34□□□□□ -1.23
PUB1P32588 OAZ1YPL052W 879 nt7.34□□□□□ -1.23 RIP-Chip
PUB1P32588 TFB4YPR056W 1017 nt7.34□□□□□ -1.23
PUB1P32588 YLR198CYLR198C 360 nt7.33□□□□□ -1.24
PUB1P32588 YBR056WYBR056W 1506 nt7.32□□□□□ -1.24
PUB1P32588 LYS20YDL182W 1287 nt7.32□□□□□ -1.24
PUB1P32588 NAS2YIL007C 663 nt7.32□□□□□ -1.24 RIP-Chip
PUB1P32588 YIR035CYIR035C 765 nt7.32□□□□□ -1.24 RIP-Chip
PUB1P32588 RSM7YJR113C 744 nt7.32□□□□□ -1.24
PUB1P32588 YJR149WYJR149W 1215 nt7.32□□□□□ -1.24
PUB1P32588 MEP1YGR121C 1479 nt7.31□□□□□ -1.24
PUB1P32588 FSH1YHR049W 732 nt7.31□□□□□ -1.24
PUB1P32588 MHO1YJR008W 1017 nt7.31□□□□□ -1.24
PUB1P32588 RMA1YKL132C 1293 nt7.31□□□□□ -1.24
PUB1P32588 RSF1YMR030W 1131 nt7.31□□□□□ -1.24
PUB1P32588 BUB2YMR055C 921 nt7.31□□□□□ -1.24
PUB1P32588 RCE1YMR274C 948 nt7.31□□□□□ -1.24 RIP-Chip
PUB1P32588 YIF1YNL263C 945 nt7.31□□□□□ -1.24 RIP-Chip
PUB1P32588 CUS2YNL286W 858 nt7.31□□□□□ -1.24
PUB1P32588 DSC2YOL073C 969 nt7.31□□□□□ -1.24 RIP-Chip
PUB1P32588 ISA2YPR067W 558 nt7.31□□□□□ -1.24 RIP-Chip
PUB1P32588 YDR510C-AYDR510C-A 117 nt7.3□□□□□ -1.24
PUB1P32588 SUT1YGL162W 900 nt7.3□□□□□ -1.24
PUB1P32588 REX3YLR107W 1215 nt7.3□□□□□ -1.24
PUB1P32588 RTG3YBL103C 1461 nt7.3□□□□□ -1.24
PUB1P32588 SDS24YBR214W 1584 nt7.29□□□□□ -1.24
PUB1P32588 ESBP6YNL125C 2022 nt7.29□□□□□ -1.24 RIP-Chip
PUB1P32588 YGR168CYGR168C 1131 nt7.29□□□□□ -1.24 RIP-Chip
PUB1P32588 DBR1YKL149C 1218 nt7.29□□□□□ -1.24
PUB1P32588 SPC24YMR117C 642 nt7.29□□□□□ -1.24
PUB1P32588 MER1YNL210W 813 nt7.29□□□□□ -1.24
PUB1P32588 RRS1YOR294W 612 nt7.29□□□□□ -1.24 RIP-Chip
PUB1P32588 FES1YBR101C 873 nt7.29□□□□□ -1.24
PUB1P32588 BSP1YPR171W 1731 nt7.29□□□□□ -1.24
PUB1P32588 YCR049CYCR049C 447 nt7.28□□□□□ -1.24
PUB1P32588 YHR028W-AYHR028W-A 321 nt7.28□□□□□ -1.24
PUB1P32588 VPS20YMR077C 666 nt7.28□□□□□ -1.24
PUB1P32588 POS5YPL188W 1245 nt7.28□□□□□ -1.24
PUB1P32588 TIF3YPR163C 1311 nt7.27□□□□□ -1.24 RIP-Chip
PUB1P32588 NDE2YDL085W 1638 nt7.27□□□□□ -1.25
PUB1P32588 KRE28YDR532C 1158 nt7.27□□□□□ -1.25
PUB1P32588 MDH2YOL126C 1134 nt7.27□□□□□ -1.25
PUB1P32588 UBS1YBR165W 834 nt7.27□□□□□ -1.25 RIP-Chip
PUB1P32588 YBR292CYBR292C 372 nt7.27□□□□□ -1.25
PUB1P32588 VBA3YCL069W 1377 nt7.27□□□□□ -1.25
PUB1P32588 PFS2YNL317W 1398 nt7.27□□□□□ -1.25
PUB1P32588 INO1YJL153C 1602 nt7.27□□□□□ -1.25
PUB1P32588 ISR1YPR106W 1332 nt7.27□□□□□ -1.25 RIP-Chip
PUB1P32588 YEL050W-AYEL050W-A 192 nt7.26□□□□□ -1.25
PUB1P32588 PCL6YER059W 1263 nt7.26□□□□□ -1.25
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms