Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 AL445529.1-201ENST00000398713 389 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 RN7SKP16-201ENST00000410180 299 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.26□□□□□ -1.57
NFKB1P19838 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC5.26□□□□□ -1.57
NFKB1P19838 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 RPL37P6-201ENST00000460682 294 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 VN1R105P-201ENST00000486595 910 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.26□□□□□ -1.57
NFKB1P19838 ATP5LP3-201ENST00000514223 304 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.26□□□□□ -1.57
NFKB1P19838 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC5.26□□□□□ -1.57
NFKB1P19838 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.26□□□□□ -1.57
NFKB1P19838 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 AC012433.1-201ENST00000588916 398 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 AL355812.1-201ENST00000603215 216 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 TEX41-280ENST00000629185 591 ntTSL 5 BASIC5.26□□□□□ -1.57
NFKB1P19838 MIR4302-201ENST00000638058 60 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 AP000756.2-201ENST00000624168 2567 ntBASIC5.26□□□□□ -1.57
NFKB1P19838 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
NFKB1P19838 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
NFKB1P19838 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 EOGT-210ENST00000615922 1931 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.25□□□□□ -1.57
NFKB1P19838 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
NFKB1P19838 RNU1-43P-201ENST00000365052 165 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AC019155.1-201ENST00000382242 574 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 SNORA51.11-201ENST00000384442 131 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RNU6-14P-201ENST00000384630 106 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 MIR600-201ENST00000385007 98 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AL391361.1-201ENST00000405580 489 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 MIR1182-201ENST00000408363 97 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RAC1P3-201ENST00000416129 580 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AL137014.1-201ENST00000420490 1226 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AC079355.1-201ENST00000421770 223 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 HMGN2P27-201ENST00000427352 270 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AC009238.2-201ENST00000431026 355 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RPS3AP46-201ENST00000448352 682 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 BX276092.4-201ENST00000452056 248 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 TRBVB-201ENST00000477100 408 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AC069499.1-201ENST00000489433 509 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RNU6-390P-201ENST00000516259 103 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RNU6-570P-201ENST00000517051 105 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RNU6-897P-201ENST00000517135 105 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 RN7SKP92-201ENST00000517266 244 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.25□□□□□ -1.57
NFKB1P19838 CBX3P8-201ENST00000532412 525 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AL359219.2-201ENST00000555184 348 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.25□□□□□ -1.57
NFKB1P19838 AC104687.2-201ENST00000604442 342 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AP005432.2-201ENST00000608162 586 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.25□□□□□ -1.57
NFKB1P19838 AL591516.1-201ENST00000611326 274 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 FTX_2.1-201ENST00000618816 94 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 AL159153.1-201ENST00000619688 317 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC5.25□□□□□ -1.57
NFKB1P19838 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.25□□□□□ -1.57
NFKB1P19838 BTBD10P1-201ENST00000549824 1352 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 FYB1-201ENST00000351578 4750 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 AC009229.4-201ENST00000623854 1947 ntBASIC5.25□□□□□ -1.57
NFKB1P19838 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
NFKB1P19838 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.25□□□□□ -1.57
NFKB1P19838 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
NFKB1P19838 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
NFKB1P19838 AC093775.1-201ENST00000624154 1868 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
NFKB1P19838 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 IRF5P1-201ENST00000504852 2164 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
NFKB1P19838 RNU6-989P-201ENST00000362756 107 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 RNY1P16-201ENST00000363063 111 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 RNU6-398P-201ENST00000384143 109 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 RNU6-821P-201ENST00000390995 107 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 AL035079.1-201ENST00000405210 287 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 RNU2-50P-201ENST00000410494 143 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 PPIAP20-201ENST00000449839 135 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC5.24□□□□□ -1.57
NFKB1P19838 RPL10P17-201ENST00000453852 316 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 RPL21P41-201ENST00000459863 264 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 AC009127.1-201ENST00000467090 155 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 OR2AO1P-201ENST00000476497 403 ntBASIC5.24□□□□□ -1.57
NFKB1P19838 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC5.24□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 216.1 ms