Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL5P18-201ENST00000406671 891 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC011933.1-201ENST00000413334 321 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 RPL7AP25-201ENST00000423357 805 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 MTATP6P4-201ENST00000427725 675 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC009238.2-201ENST00000431026 355 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 NDUFB4P8-201ENST00000435351 367 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 PRDX3P3-201ENST00000447765 522 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 IGBP1P4-201ENST00000503202 879 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 IGLVIV-65-201ENST00000517313 360 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AP004371.1-201ENST00000525240 214 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC108738.1-201ENST00000603703 237 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AP000942.4-201ENST00000604811 241 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL591034.3-201ENST00000605511 685 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL355802.3-201ENST00000607571 545 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AL157817.1-201ENST00000614264 790 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AC022418.1-201ENST00000624118 445 ntBASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.67□□□□□ -1.5
TMEM88BA6NKF7 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RNU6-288P-201ENST00000363690 104 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 Y_RNA.480-201ENST00000384364 102 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 PPIAP31-201ENST00000405422 495 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RNA5SP296-201ENST00000410523 111 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 AL160275.3-201ENST00000423876 471 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 ATP5HP2-201ENST00000433885 485 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 AL132765.1-201ENST00000434165 553 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 snoU13.24-201ENST00000458998 104 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RN7SL814P-201ENST00000487715 300 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RPS15AP34-201ENST00000487776 387 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 AC005741.1-201ENST00000511094 432 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 SNORA31.3-201ENST00000516029 96 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RNU4ATAC7P-201ENST00000516280 125 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 SNORA31.22-201ENST00000517204 135 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 APOOP3-201ENST00000536787 586 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 AC124303.1-201ENST00000605703 360 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 AL138726.1-201ENST00000614873 333 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 MIR492-201ENST00000638676 116 ntBASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 ZNF345-216ENST00000640438 963 ntTSL 5 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
TMEM88BA6NKF7 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC009812.4-201ENST00000569134 1805 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 PTMAP2-201ENST00000397627 327 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AL022722.2-201ENST00000402519 180 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AL139397.2-201ENST00000404529 772 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 RNU4-14P-201ENST00000410858 122 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 RNU6-954P-201ENST00000411355 107 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 RPL21P109-201ENST00000422213 475 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 LAMTOR5P1-201ENST00000444290 270 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 CYCSP24-201ENST00000445119 316 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 TBCAP3-201ENST00000512475 312 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC093303.1-201ENST00000514549 295 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 RNU6-1069P-201ENST00000516612 133 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AC087854.1-201ENST00000519706 414 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 RN7SL652P-201ENST00000577769 300 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 SNRPGP17-201ENST00000603780 214 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AL670379.10-201ENST00000604330 253 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 AL670379.9-201ENST00000605428 253 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 DUSP12P1-201ENST00000612874 516 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 SNX18P1Y-201ENST00000616231 511 ntBASIC5.65□□□□□ -1.5
TMEM88BA6NKF7 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms