Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 AL133388.1-201ENST00000404509 287 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 RPL37P18-201ENST00000411602 243 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AC006946.1-201ENST00000429106 328 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 HMGB1P27-201ENST00000431429 603 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 TPT1P13-201ENST00000449760 499 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 RN7SL329P-201ENST00000467740 299 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 RN7SL547P-201ENST00000490793 290 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AC110792.1-201ENST00000491826 472 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-911P-201ENST00000516523 104 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 TRAV32-201ENST00000553993 340 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 RPS29P30-201ENST00000600975 111 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AC009779.6-201ENST00000603972 165 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 MIR1244-1-201ENST00000612829 85 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 FP236240.3-201ENST00000623061 327 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AL592430.2-201ENST00000633779 486 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 MIR1244-3-201ENST00000635744 85 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 MIR1244-2-201ENST00000636449 85 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 MIR1244-4-202ENST00000636813 85 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 PRO1804-201ENST00000623780 2050 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 AC139769.1-204ENST00000472297 1931 ntBASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 GPN1-205ENST00000458167 1618 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDHB9Q9Y5E1 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-212P-201ENST00000362642 104 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 RNA5SP507-201ENST00000363603 121 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 RNA5SP30-201ENST00000365552 115 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-611P-201ENST00000384276 104 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AL133270.1-201ENST00000402635 279 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 MIR548H3-201ENST00000408771 118 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AL353621.1-201ENST00000418219 243 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 KRT8P51-201ENST00000438938 274 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AC100832.1-201ENST00000471945 383 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 RPS17P5-201ENST00000498293 408 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AC068446.3-201ENST00000555285 382 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 CPDP1-201ENST00000579660 283 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 SNORD39.4-201ENST00000620099 78 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 PABPC1P6-201ENST00000445594 1829 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 Z95114.1-201ENST00000624264 14574 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 AC018809.2-201ENST00000602436 3823 ntBASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.73□□□□□ -1.49
PCDHB9Q9Y5E1 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC125336.1-201ENST00000508893 2827 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 RNA5SP319-201ENST00000362768 119 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 Y_RNA.471-201ENST00000384312 102 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC009804.1-201ENST00000400949 179 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AL591034.2-201ENST00000402839 359 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 RNU4-78P-201ENST00000410940 126 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AL121871.1-201ENST00000443413 436 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AL392103.1-201ENST00000447000 198 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 RN7SL172P-201ENST00000460535 303 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 RPL23AP2-201ENST00000471227 466 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 RNU6-840P-201ENST00000517275 65 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC034114.1-201ENST00000520293 285 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC022790.1-201ENST00000522872 204 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 AC024940.4-201ENST00000605507 246 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 MIR3976-201ENST00000606807 139 ntBASIC5.72□□□□□ -1.49
PCDHB9Q9Y5E1 FTX_2.1-201ENST00000618816 94 ntBASIC5.72□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 2013.6 ms