Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.63■□□□□ 0.25
SFTPBP07988 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.63■□□□□ 0.25
SFTPBP07988 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.63■□□□□ 0.25
SFTPBP07988 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SFTPBP07988 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.63■□□□□ 0.25
SFTPBP07988 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SFTPBP07988 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 AC026366.1-201ENST00000488803 879 ntBASIC16.63■□□□□ 0.25
SFTPBP07988 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC16.63■□□□□ 0.25
SFTPBP07988 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SFTPBP07988 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
SFTPBP07988 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.63■□□□□ 0.25
SFTPBP07988 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
SFTPBP07988 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SFTPBP07988 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 TFP1-202ENST00000475455 1573 ntBASIC16.63■□□□□ 0.25
SFTPBP07988 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC16.63■□□□□ 0.25
SFTPBP07988 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
SFTPBP07988 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
SFTPBP07988 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 NEFHP1-201ENST00000412845 2629 ntBASIC16.62■□□□□ 0.25
SFTPBP07988 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 PRORSD1P-201ENST00000295112 541 ntBASIC16.62■□□□□ 0.25
SFTPBP07988 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC16.62■□□□□ 0.25
SFTPBP07988 GGT1-206ENST00000404223 952 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.62■□□□□ 0.25
SFTPBP07988 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.62■□□□□ 0.25
SFTPBP07988 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.62■□□□□ 0.25
SFTPBP07988 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC16.62■□□□□ 0.25
SFTPBP07988 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.62■□□□□ 0.25
SFTPBP07988 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.62■□□□□ 0.25
SFTPBP07988 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SFTPBP07988 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SFTPBP07988 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.61■□□□□ 0.25
SFTPBP07988 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 SOX15-203ENST00000570788 1093 ntBASIC16.61■□□□□ 0.25
SFTPBP07988 AC008687.6-201ENST00000596318 630 ntBASIC16.61■□□□□ 0.25
SFTPBP07988 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
SFTPBP07988 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SFTPBP07988 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.61■□□□□ 0.25
SFTPBP07988 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SFTPBP07988 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 134.1 ms