Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 CFAP221-215ENST00000598644 1532 ntTSL 2 BASIC5.32□□□□□ -1.56
EPHB3P54753 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
EPHB3P54753 AC024560.2-201ENST00000507981 1497 ntBASIC5.32□□□□□ -1.56
EPHB3P54753 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
EPHB3P54753 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.32□□□□□ -1.56
EPHB3P54753 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 ZNF83-204ENST00000545872 2633 ntAPPRIS P1 TSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHB3P54753 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EPHB3P54753 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EPHB3P54753 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 USP8-204ENST00000425032 3559 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 AC112198.2-201ENST00000426589 6996 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 OR1L6-202ENST00000373684 1044 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SNORA2.3-201ENST00000383920 135 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 RNA5SP87-201ENST00000384155 118 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 RNU6-532P-201ENST00000384318 107 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
EPHB3P54753 AL034374.1-201ENST00000406329 351 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 OR9R1P-201ENST00000412200 877 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 RPL26P29-201ENST00000415623 438 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SPA17P1-201ENST00000416656 452 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 NPM1P34-201ENST00000428821 893 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 MTND3P2-201ENST00000438452 342 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 HMGB3P12-201ENST00000438745 556 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SEPT14P3-201ENST00000439401 183 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 H2AFZP6-201ENST00000444403 394 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AL732372.2-207ENST00000445840 183 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHB3P54753 AC090804.1-201ENST00000448870 490 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 IGHV5-78-201ENST00000450948 295 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 BX842559.2-201ENST00000451418 605 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SEPT14P2-201ENST00000453405 183 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 MTND1P12-201ENST00000455231 147 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AC021205.1-201ENST00000468797 348 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SEPT14P4-201ENST00000513445 186 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC5.31□□□□□ -1.56
EPHB3P54753 FO082796.1-201ENST00000523795 183 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AP005597.4-201ENST00000526762 229 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AP000790.1-201ENST00000528891 737 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 AC097468.3-201ENST00000607956 456 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AP001521.2-201ENST00000608772 546 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AL603758.1-201ENST00000618654 241 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 AP006248.2-201ENST00000623309 592 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SDAD1P1-202ENST00000524156 2051 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 AC016745.2-201ENST00000608834 3443 ntBASIC5.31□□□□□ -1.56
EPHB3P54753 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EPHB3P54753 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.31□□□□□ -1.56
EPHB3P54753 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
EPHB3P54753 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.31□□□□□ -1.56
EPHB3P54753 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
EPHB3P54753 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHB3P54753 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC006484.1-201ENST00000435086 1884 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC046144.1-201ENST00000478559 1853 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
EPHB3P54753 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
EPHB3P54753 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
EPHB3P54753 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
EPHB3P54753 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
EPHB3P54753 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHB3P54753 AP005435.3-201ENST00000531260 3198 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 RN7SKP145-201ENST00000363291 303 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHB3P54753 NANOGP6-201ENST00000429190 847 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 DYNLL1P7-201ENST00000429273 258 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 BX323845.1-201ENST00000432417 179 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 RPL7P54-201ENST00000438336 674 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 MRPL50P4-201ENST00000446432 475 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 RPL7P59-201ENST00000447700 943 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 TCEA1P1-201ENST00000449716 880 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AL121877.1-201ENST00000453704 622 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC096741.1-201ENST00000472250 846 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.3□□□□□ -1.56
EPHB3P54753 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 POLR2KP1-201ENST00000553226 168 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 AC055876.1-202ENST00000567053 138 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 MIR4737-201ENST00000583979 81 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC5.3□□□□□ -1.56
EPHB3P54753 HMGN1P30-201ENST00000589286 268 ntBASIC5.3□□□□□ -1.56
EPHB3P54753 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms