Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 Y_RNA.482-201ENST00000384377 111 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 MRPL42P3-201ENST00000401492 326 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CYCSP52-201ENST00000422857 310 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 SKA2P1-201ENST00000425592 390 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 PSMA6P3-201ENST00000428242 164 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC020550.1-201ENST00000447385 163 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CECR9-201ENST00000453421 199 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CBX1P2-201ENST00000453841 458 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 SETP20-201ENST00000457046 852 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 RNU6-1218P-201ENST00000458990 108 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AL136126.1-201ENST00000473603 402 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 TRBVA-201ENST00000498804 316 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC093767.1-201ENST00000504523 156 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 HMGN1P9-201ENST00000515212 298 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 RNU6-764P-201ENST00000516396 105 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 RNU7-51P-201ENST00000516560 62 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 HMGB1P41-201ENST00000520234 440 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AP000763.2-201ENST00000540641 163 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC068993.1-201ENST00000546724 589 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC023968.1-201ENST00000560719 475 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC069061.3-201ENST00000582254 823 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC097467.4-201ENST00000605504 141 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 Z82243.1-201ENST00000609432 473 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AL390240.1-201ENST00000612950 384 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AP001486.3-201ENST00000615334 372 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AL049794.2-201ENST00000616301 365 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC098657.3-201ENST00000620434 263 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 PRLR-216ENST00000542609 1764 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AC010624.4-201ENST00000597606 1351 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 SAGE3P-201ENST00000619800 1635 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 AL161901.1-201ENST00000624954 3425 ntBASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.53□□□□□ -1.36
PCDHB9Q9Y5E1 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC6.52□□□□□ -1.36
PCDHB9Q9Y5E1 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 HSPD1P8-201ENST00000400121 1658 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 CENPJ-206ENST00000616936 5020 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 AC016251.2-201ENST00000623393 3089 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 ARHGEF6-201ENST00000250617 6019 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 NXF2B-203ENST00000604395 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 NXF2-201ENST00000604790 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 AL138713.1-201ENST00000624026 2130 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 AP002370.1-201ENST00000528055 1602 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 Y_RNA.5-201ENST00000362334 102 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 Y_RNA.135-201ENST00000363439 95 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 RNU6-511P-201ENST00000363496 107 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 Y_RNA.188-201ENST00000363952 111 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 RN7SKP275-201ENST00000364626 301 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 RNU2-22P-201ENST00000411266 212 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 VDAC1P9-201ENST00000412766 841 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 MCFD2P1-201ENST00000417812 300 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 FABP7P2-201ENST00000429946 379 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 RPL7P43-201ENST00000478876 753 ntBASIC6.52□□□□□ -1.37
PCDHB9Q9Y5E1 RPS27P27-201ENST00000498779 255 ntBASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 151.1 ms