Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EPHB3P54753 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
EPHB3P54753 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
EPHB3P54753 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
EPHB3P54753 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EPHB3P54753 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.53□□□□□ -1.52
EPHB3P54753 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
EPHB3P54753 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
EPHB3P54753 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EPHB3P54753 AL645937.1-201ENST00000641739 1652 ntBASIC5.53□□□□□ -1.52
EPHB3P54753 AL031985.3-201ENST00000565390 2449 ntBASIC5.53□□□□□ -1.52
EPHB3P54753 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.53□□□□□ -1.52
EPHB3P54753 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
EPHB3P54753 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC023421.1-201ENST00000590535 1785 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 AL121839.2-201ENST00000565058 6943 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC009962.1-201ENST00000567327 3813 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 U3.3-201ENST00000362986 216 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RN7SKP103-201ENST00000363848 320 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RNU6-878P-201ENST00000384578 110 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 MIR585-201ENST00000384887 94 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RPL23AP29-201ENST00000397284 453 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AL109941.1-201ENST00000401925 229 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RN7SKP17-201ENST00000411242 351 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 ZNF90P2-204ENST00000419323 1075 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 GAPDHP49-201ENST00000421421 961 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AL009174.1-201ENST00000426577 416 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 RPS29P10-201ENST00000439197 166 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 USP9YP12-201ENST00000450481 570 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC022364.2-201ENST00000457963 554 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RPL35AP28-201ENST00000459730 331 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC097484.1-201ENST00000471148 389 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC022133.1-201ENST00000490961 571 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC5.52□□□□□ -1.53
EPHB3P54753 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 RNY4P37-201ENST00000516225 96 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 Y_RNA.704-201ENST00000516851 102 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC5.52□□□□□ -1.53
EPHB3P54753 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC025678.1-201ENST00000567861 338 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC5.52□□□□□ -1.53
EPHB3P54753 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.52□□□□□ -1.53
EPHB3P54753 AL360085.1-201ENST00000604713 532 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 RNU6-88P-201ENST00000606801 100 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AL136295.6-201ENST00000610486 658 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.52□□□□□ -1.53
EPHB3P54753 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
EPHB3P54753 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
EPHB3P54753 HSPA8P17-201ENST00000427029 1382 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC138915.3-201ENST00000562908 1389 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 AC083899.1-201ENST00000454465 3819 ntBASIC5.52□□□□□ -1.53
EPHB3P54753 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EPHB3P54753 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 AC100757.1-201ENST00000616872 1835 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 AC004076.2-201ENST00000620532 3323 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EPHB3P54753 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 SNURFL-201ENST00000309296 343 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
EPHB3P54753 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
EPHB3P54753 SYF2-202ENST00000354361 926 ntTSL 2 BASIC5.51□□□□□ -1.53
EPHB3P54753 Y_RNA.97-201ENST00000363094 102 ntBASIC5.51□□□□□ -1.53
EPHB3P54753 SNORD56.2-201ENST00000363242 71 ntBASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 224.7 ms