Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 TSPY20P-201ENST00000450910 630 ntBASIC18.64■□□□□ 0.57
KRT78Q8N1N4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.64■□□□□ 0.57
KRT78Q8N1N4 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 KRT18P29-201ENST00000397031 1267 ntBASIC18.63■□□□□ 0.57
KRT78Q8N1N4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 C1QBPP2-201ENST00000528754 825 ntBASIC18.63■□□□□ 0.57
KRT78Q8N1N4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 C1QL1P1-201ENST00000568105 661 ntBASIC18.63■□□□□ 0.57
KRT78Q8N1N4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 ITM2C-210ENST00000620962 501 ntBASIC18.63■□□□□ 0.57
KRT78Q8N1N4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.63■□□□□ 0.57
KRT78Q8N1N4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.62■□□□□ 0.57
KRT78Q8N1N4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 AL032819.2-201ENST00000624543 2162 ntBASIC18.61■□□□□ 0.57
KRT78Q8N1N4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
KRT78Q8N1N4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 AC104417.2-201ENST00000562989 1793 ntBASIC18.6■□□□□ 0.57
KRT78Q8N1N4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
KRT78Q8N1N4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms