Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC21.17■□□□□ 0.98
COPB1P53618 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPB1P53618 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
COPB1P53618 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COPB1P53618 FP475955.4-201ENST00000623131 1990 ntBASIC21.17■□□□□ 0.98
COPB1P53618 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC21.17■□□□□ 0.98
COPB1P53618 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.17■□□□□ 0.98
COPB1P53618 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPB1P53618 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COPB1P53618 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.16■□□□□ 0.98
COPB1P53618 GUSBP6-202ENST00000438529 1198 ntBASIC21.16■□□□□ 0.98
COPB1P53618 YBX1P10-201ENST00000444752 975 ntBASIC21.16■□□□□ 0.98
COPB1P53618 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC21.16■□□□□ 0.98
COPB1P53618 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COPB1P53618 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC21.16■□□□□ 0.98
COPB1P53618 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
COPB1P53618 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
COPB1P53618 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COPB1P53618 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.16■□□□□ 0.98
COPB1P53618 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC21.15■□□□□ 0.98
COPB1P53618 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COPB1P53618 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC21.15■□□□□ 0.98
COPB1P53618 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COPB1P53618 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.15■□□□□ 0.98
COPB1P53618 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
COPB1P53618 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
COPB1P53618 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC21.15■□□□□ 0.98
COPB1P53618 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COPB1P53618 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPB1P53618 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.14■□□□□ 0.98
COPB1P53618 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPB1P53618 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPB1P53618 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COPB1P53618 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COPB1P53618 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC21.14■□□□□ 0.98
COPB1P53618 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC21.14■□□□□ 0.98
COPB1P53618 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COPB1P53618 USP39-202ENST00000409025 1946 ntTSL 5 BASIC21.14■□□□□ 0.98
COPB1P53618 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC21.14■□□□□ 0.97
COPB1P53618 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.14■□□□□ 0.97
COPB1P53618 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 AC006970.2-201ENST00000450065 779 ntBASIC21.14■□□□□ 0.97
COPB1P53618 GATS-209ENST00000454084 1030 ntTSL 3 BASIC21.14■□□□□ 0.97
COPB1P53618 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.14■□□□□ 0.97
COPB1P53618 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 AL121906.2-201ENST00000621597 723 ntBASIC21.14■□□□□ 0.97
COPB1P53618 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC21.14■□□□□ 0.97
COPB1P53618 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.14■□□□□ 0.97
COPB1P53618 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
COPB1P53618 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.14■□□□□ 0.97
COPB1P53618 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.14■□□□□ 0.97
COPB1P53618 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.14■□□□□ 0.97
COPB1P53618 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC21.13■□□□□ 0.97
COPB1P53618 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPB1P53618 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COPB1P53618 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPB1P53618 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPB1P53618 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
COPB1P53618 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPB1P53618 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
COPB1P53618 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms