Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 AC089999.3-201ENST00000622440 577 ntBASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 DDX58-202ENST00000379883 4353 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 FOCAD-201ENST00000338382 5765 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 DEFB132-201ENST00000382376 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
PCDHB9Q9Y5E1 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC110597.1-201ENST00000562669 3176 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 FYB1-209ENST00000512982 2747 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LINC02249-202ENST00000562624 4260 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 ARPP21-220ENST00000441454 2880 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 SERPINB8-208ENST00000542677 3192 ntTSL 2 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 STAG3L4-201ENST00000352103 530 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AL161781.1-201ENST00000354277 403 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RNU1-85P-201ENST00000364127 164 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RNU1-55P-201ENST00000365510 158 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RNU4-48P-201ENST00000365559 182 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 SNORA51.6-201ENST00000384151 125 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AL391419.1-201ENST00000398901 1275 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC137499.1-201ENST00000427602 88 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC239367.3-201ENST00000428996 814 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC091390.2-201ENST00000432573 374 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RPS3AP52-201ENST00000435639 297 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 CRYGGP-201ENST00000443337 145 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LINC01594-201ENST00000445083 611 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC097359.1-201ENST00000447946 463 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RPL7AP23-201ENST00000482625 776 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RPS4XP14-201ENST00000493072 781 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC091849.1-201ENST00000509920 121 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 FAM206BP-201ENST00000510179 541 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SKP196-201ENST00000516267 345 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 ZNF705CP-201ENST00000530515 889 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC005363.1-201ENST00000530779 351 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC012464.1-201ENST00000550687 540 ntTSL 4 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SL199P-201ENST00000578752 281 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SL656P-201ENST00000579044 281 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SL753P-201ENST00000581238 290 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 RN7SL404P-201ENST00000582421 281 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 uc_338.15-201ENST00000615470 191 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 AC007823.1-201ENST00000569932 1566 ntBASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 TRIM34-201ENST00000429814 2311 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 TLR4-202ENST00000394487 3908 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
PCDHB9Q9Y5E1 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 Z97989.1-201ENST00000531702 2421 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 NBPF12-206ENST00000617844 6326 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 MTND5P33-201ENST00000571250 1450 ntBASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
PCDHB9Q9Y5E1 CS-201ENST00000351328 2975 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 143.9 ms