Protein–RNA interactions for Protein: S4R434

TMEM56-RWDD3, TMEM56-RWDD3 readthrough, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3S4R434 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 COMP-202ENST00000425807 2292 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 AC005837.3-201ENST00000612163 286 ntBASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 AC018553.1-201ENST00000616682 1458 ntBASIC15.91■□□□□ 0.14
TMEM56-RWDD3S4R434 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
TMEM56-RWDD3S4R434 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 WIZP1-201ENST00000531444 2299 ntBASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
TMEM56-RWDD3S4R434 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 ZNF815P-204ENST00000434898 1737 ntBASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 AC116351.2-201ENST00000606540 1585 ntBASIC15.88■□□□□ 0.13
TMEM56-RWDD3S4R434 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms