Protein–RNA interactions for Protein: Q9BRG1

VPS25, Vacuolar protein-sorting-associated protein 25, humanhuman

Predictions only

Length 176 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25Q9BRG1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
VPS25Q9BRG1 AC027702.1-201ENST00000563810 1770 ntBASIC13.6□□□□□ -0.23
VPS25Q9BRG1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 DUX4L29-201ENST00000425409 679 ntBASIC13.6□□□□□ -0.23
VPS25Q9BRG1 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC13.6□□□□□ -0.23
VPS25Q9BRG1 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 PLXDC1-201ENST00000315392 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 C1R-202ENST00000536053 2347 ntTSL 2 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
VPS25Q9BRG1 NSMCE4A-202ENST00000369023 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
VPS25Q9BRG1 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 AL161729.1-201ENST00000604104 1402 ntBASIC13.58□□□□□ -0.24
VPS25Q9BRG1 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 AC044849.2-201ENST00000606596 710 ntBASIC13.58□□□□□ -0.24
VPS25Q9BRG1 MED25-210ENST00000612854 801 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 MED25-214ENST00000622402 642 ntTSL 5 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
VPS25Q9BRG1 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms