Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL1A2P08123 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
COL1A2P08123 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC21.43■■□□□ 1.02
COL1A2P08123 AL137013.1-201ENST00000432946 1228 ntBASIC21.43■■□□□ 1.02
COL1A2P08123 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.43■■□□□ 1.02
COL1A2P08123 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.43■■□□□ 1.02
COL1A2P08123 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC21.43■■□□□ 1.02
COL1A2P08123 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.43■■□□□ 1.02
COL1A2P08123 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.43■■□□□ 1.02
COL1A2P08123 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
COL1A2P08123 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
COL1A2P08123 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 LINC01465-201ENST00000408887 1940 ntBASIC21.42■■□□□ 1.02
COL1A2P08123 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 SLC25A1P2-201ENST00000430693 912 ntBASIC21.42■■□□□ 1.02
COL1A2P08123 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.42■■□□□ 1.02
COL1A2P08123 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.42■■□□□ 1.02
COL1A2P08123 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.42■■□□□ 1.02
COL1A2P08123 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.42■■□□□ 1.02
COL1A2P08123 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC21.42■■□□□ 1.02
COL1A2P08123 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
COL1A2P08123 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC21.41■■□□□ 1.02
COL1A2P08123 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL1A2P08123 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
COL1A2P08123 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.41■■□□□ 1.02
COL1A2P08123 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 CCR12P-201ENST00000446203 998 ntBASIC21.41■■□□□ 1.02
COL1A2P08123 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.41■■□□□ 1.02
COL1A2P08123 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.41■■□□□ 1.02
COL1A2P08123 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
COL1A2P08123 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
COL1A2P08123 KRT18P57-201ENST00000443599 1254 ntBASIC21.4■■□□□ 1.02
COL1A2P08123 ECEL1P2-202ENST00000465689 757 ntBASIC21.4■■□□□ 1.02
COL1A2P08123 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.4■■□□□ 1.02
COL1A2P08123 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
COL1A2P08123 FAM87A-204ENST00000613235 858 ntBASIC21.4■■□□□ 1.02
COL1A2P08123 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 AC116562.4-202ENST00000641738 218 ntBASIC21.4■■□□□ 1.02
COL1A2P08123 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.4■■□□□ 1.02
COL1A2P08123 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC21.4■■□□□ 1.02
COL1A2P08123 LINC01006-201ENST00000333319 2292 ntBASIC21.4■■□□□ 1.02
COL1A2P08123 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
COL1A2P08123 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.4■■□□□ 1.02
COL1A2P08123 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
COL1A2P08123 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC21.4■■□□□ 1.02
COL1A2P08123 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.02
COL1A2P08123 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
COL1A2P08123 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.39■■□□□ 1.02
COL1A2P08123 CA15P1-201ENST00000481698 905 ntBASIC21.39■■□□□ 1.02
COL1A2P08123 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.39■■□□□ 1.01
COL1A2P08123 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL1A2P08123 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL1A2P08123 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
COL1A2P08123 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.39■■□□□ 1.01
COL1A2P08123 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
COL1A2P08123 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.39■■□□□ 1.01
COL1A2P08123 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.39■■□□□ 1.01
COL1A2P08123 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL1A2P08123 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
COL1A2P08123 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
COL1A2P08123 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
COL1A2P08123 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
COL1A2P08123 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
COL1A2P08123 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC21.38■■□□□ 1.01
COL1A2P08123 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC21.38■■□□□ 1.01
COL1A2P08123 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms