Protein–RNA interactions for Protein: Q07878

VPS13, Vacuolar protein sorting-associated protein 13, yeastyeast

Predictions only

Length 3,144 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS13Q07878 ADH6YMR318C 1083 nt8.4□□□□□ -1.06
VPS13Q07878 RSM7YJR113C 744 nt8.4□□□□□ -1.07
VPS13Q07878 CYS4YGR155W 1524 nt8.39□□□□□ -1.07
VPS13Q07878 DLD3YEL071W 1491 nt8.39□□□□□ -1.07
VPS13Q07878 RHO1YPR165W 630 nt8.38□□□□□ -1.07
VPS13Q07878 LGE1YPL055C 999 nt8.38□□□□□ -1.07
VPS13Q07878 ERV2YPR037C 591 nt8.38□□□□□ -1.07
VPS13Q07878 PLB3YOL011W 2061 nt8.37□□□□□ -1.07
VPS13Q07878 YDL086WYDL086W 822 nt8.36□□□□□ -1.07
VPS13Q07878 FYV1YDR024W 486 nt8.36□□□□□ -1.07
VPS13Q07878 RNA170RNA170 169 nt8.36□□□□□ -1.07
VPS13Q07878 YAT1YAR035W 2064 nt8.36□□□□□ -1.07
VPS13Q07878 CIA1YDR267C 993 nt8.36□□□□□ -1.07
VPS13Q07878 YML122CYML122C 381 nt8.36□□□□□ -1.07
VPS13Q07878 GAS1YMR307W 1680 nt8.35□□□□□ -1.07
VPS13Q07878 YDL144CYDL144C 1071 nt8.34□□□□□ -1.07
VPS13Q07878 YLR046CYLR046C 813 nt8.34□□□□□ -1.07
VPS13Q07878 YPL136WYPL136W 369 nt8.34□□□□□ -1.07
VPS13Q07878 YDR387CYDR387C 1668 nt8.34□□□□□ -1.08
VPS13Q07878 MED6YHR058C 888 nt8.34□□□□□ -1.08
VPS13Q07878 VPS62YGR141W 1404 nt8.33□□□□□ -1.08
VPS13Q07878 ENT4YLL038C 744 nt8.33□□□□□ -1.08
VPS13Q07878 YKL147CYKL147C 618 nt8.32□□□□□ -1.08
VPS13Q07878 OLA1YBR025C 1185 nt8.31□□□□□ -1.08
VPS13Q07878 OPI7YDR360W 435 nt8.3□□□□□ -1.08
VPS13Q07878 PUP3YER094C 618 nt8.3□□□□□ -1.08
VPS13Q07878 MEP1YGR121C 1479 nt8.3□□□□□ -1.08
VPS13Q07878 HXT8YJL214W 1710 nt8.3□□□□□ -1.08
VPS13Q07878 MRPL19YNL185C 477 nt8.29□□□□□ -1.08
VPS13Q07878 snR31snR31 225 nt8.29□□□□□ -1.08
VPS13Q07878 CKI1YLR133W 1749 nt8.28□□□□□ -1.08
VPS13Q07878 OPI1YHL020C 1215 nt8.28□□□□□ -1.08
VPS13Q07878 YMR316C-BYMR316C-B 309 nt8.28□□□□□ -1.08
VPS13Q07878 YKL153WYKL153W 510 nt8.26□□□□□ -1.09
VPS13Q07878 SPT3YDR392W 1014 nt8.25□□□□□ -1.09
VPS13Q07878 PTH2YBL057C 627 nt8.25□□□□□ -1.09
VPS13Q07878 MSI1YBR195C 1269 nt8.25□□□□□ -1.09
VPS13Q07878 YEL075W-AYEL075W-A 612 nt8.25□□□□□ -1.09
VPS13Q07878 YLR463CYLR463C 552 nt8.25□□□□□ -1.09
VPS13Q07878 ERG10YPL028W 1197 nt8.25□□□□□ -1.09
VPS13Q07878 YKL133CYKL133C 1392 nt8.24□□□□□ -1.09
VPS13Q07878 JHD1YER051W 1479 nt8.24□□□□□ -1.09
VPS13Q07878 MBF1YOR298C-A 456 nt8.24□□□□□ -1.09
VPS13Q07878 MRPL35YDR322W 1104 nt8.23□□□□□ -1.09
VPS13Q07878 MRS6YOR370C 1812 nt8.23□□□□□ -1.09
VPS13Q07878 CPT1YNL130C 1182 nt8.22□□□□□ -1.09
VPS13Q07878 TIM50YPL063W 1431 nt8.22□□□□□ -1.09
VPS13Q07878 BOR1YNL275W 1731 nt8.22□□□□□ -1.09
VPS13Q07878 RPC82YPR190C 1965 nt8.22□□□□□ -1.09
VPS13Q07878 THI73YLR004C 1572 nt8.21□□□□□ -1.1
VPS13Q07878 YIP4YGL198W 708 nt8.21□□□□□ -1.1
VPS13Q07878 PDA1YER178W 1263 nt8.2□□□□□ -1.1
VPS13Q07878 DCR2YLR361C 1737 nt8.2□□□□□ -1.1
VPS13Q07878 PRS4YBL068W 981 nt8.2□□□□□ -1.1
VPS13Q07878 ARO3YDR035W 1113 nt8.19□□□□□ -1.1
VPS13Q07878 YER152CYER152C 1332 nt8.19□□□□□ -1.1
VPS13Q07878 DRE2YKR071C 1047 nt8.18□□□□□ -1.1
VPS13Q07878 DPM1YPR183W 804 nt8.18□□□□□ -1.1
VPS13Q07878 NMA2YGR010W 1188 nt8.18□□□□□ -1.1
VPS13Q07878 THI3YDL080C 1830 nt8.17□□□□□ -1.1
VPS13Q07878 PRE3YJL001W 648 nt8.17□□□□□ -1.1
VPS13Q07878 LSR1LSR1 1175 nt8.17□□□□□ -1.1
VPS13Q07878 RBS1YDL189W 1374 nt8.17□□□□□ -1.1
VPS13Q07878 snR30snR30 606 nt8.16□□□□□ -1.1
VPS13Q07878 IMG1YCR046C 510 nt8.16□□□□□ -1.1
VPS13Q07878 RAD59YDL059C 717 nt8.16□□□□□ -1.1
VPS13Q07878 FPR3YML074C 1236 nt8.16□□□□□ -1.1
VPS13Q07878 AGP3YFL055W 1677 nt8.14□□□□□ -1.11
VPS13Q07878 YHR218WYHR218W 1812 nt8.14□□□□□ -1.11
VPS13Q07878 YLR162WYLR162W 357 nt8.13□□□□□ -1.11
VPS13Q07878 LRO1YNR008W 1986 nt8.13□□□□□ -1.11
VPS13Q07878 RPN14YGL004C 1254 nt8.12□□□□□ -1.11
VPS13Q07878 CDC3YLR314C 1563 nt8.12□□□□□ -1.11
VPS13Q07878 GLY1YEL046C 1164 nt8.12□□□□□ -1.11
VPS13Q07878 FCY22YER060W-A 1593 nt8.12□□□□□ -1.11
VPS13Q07878 TIF3YPR163C 1311 nt8.11□□□□□ -1.11
VPS13Q07878 MET13YGL125W 1803 nt8.11□□□□□ -1.11
VPS13Q07878 FSF1YOR271C 984 nt8.1□□□□□ -1.11
VPS13Q07878 HOC1YJR075W 1191 nt8.08□□□□□ -1.12
VPS13Q07878 YJR142WYJR142W 1029 nt8.07□□□□□ -1.12
VPS13Q07878 ARO8YGL202W 1503 nt8.07□□□□□ -1.12
VPS13Q07878 ARG7YMR062C 1326 nt8.07□□□□□ -1.12
VPS13Q07878 OPI10YOL032W 741 nt8.07□□□□□ -1.12
VPS13Q07878 YOR325WYOR325W 474 nt8.07□□□□□ -1.12
VPS13Q07878 YGL081WYGL081W 963 nt8.06□□□□□ -1.12
VPS13Q07878 GID8YMR135C 1368 nt8.05□□□□□ -1.12
VPS13Q07878 SML1YML058W 315 nt8.05□□□□□ -1.12
VPS13Q07878 NFS1YCL017C 1494 nt8.05□□□□□ -1.12
VPS13Q07878 COQ3YOL096C 939 nt8.03□□□□□ -1.12
VPS13Q07878 YHR218W-AYHR218W-A 318 nt8.03□□□□□ -1.12
VPS13Q07878 YBL112CYBL112C 318 nt8.03□□□□□ -1.12
VPS13Q07878 ILV6YCL009C 930 nt8.02□□□□□ -1.13
VPS13Q07878 SNX3YOR357C 489 nt8.01□□□□□ -1.13
VPS13Q07878 NAF1YNL124W 1479 nt8.01□□□□□ -1.13
VPS13Q07878 BEM1YBR200W 1656 nt7.99□□□□□ -1.13
VPS13Q07878 PAB1YER165W 1734 nt7.99□□□□□ -1.13
VPS13Q07878 GPD1YDL022W 1176 nt7.98□□□□□ -1.13
VPS13Q07878 ODC1YPL134C 933 nt7.98□□□□□ -1.13
VPS13Q07878 DPL1YDR294C 1770 nt7.98□□□□□ -1.13
VPS13Q07878 STE3YKL178C 1413 nt7.97□□□□□ -1.13
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms