Protein–RNA interactions for Protein: P47111

VPS55, Vacuolar protein sorting-associated protein 55, yeastyeast

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS55P47111 DUR3YHL016C 2208 nt6.39□□□□□ -1.39
VPS55P47111 YIR035CYIR035C 765 nt6.38□□□□□ -1.39
VPS55P47111 MET30YIL046W 1923 nt6.37□□□□□ -1.39
VPS55P47111 POP2YNR052C 1302 nt6.37□□□□□ -1.39
VPS55P47111 LSP1YPL004C 1026 nt6.37□□□□□ -1.39
VPS55P47111 AAC3YBR085W 924 nt6.37□□□□□ -1.39
VPS55P47111 YMC2YBR104W 990 nt6.37□□□□□ -1.39
VPS55P47111 FET5YFL041W 1869 nt6.36□□□□□ -1.39
VPS55P47111 TMS1YDR105C 1422 nt6.36□□□□□ -1.39
VPS55P47111 RRT14YIL127C 621 nt6.36□□□□□ -1.39
VPS55P47111 YNL190WYNL190W 615 nt6.36□□□□□ -1.39
VPS55P47111 OLA1YBR025C 1185 nt6.36□□□□□ -1.39
VPS55P47111 YJL160CYJL160C 864 nt6.35□□□□□ -1.39
VPS55P47111 MET22YOL064C 1074 nt6.35□□□□□ -1.39
VPS55P47111 HEM14YER014W 1620 nt6.35□□□□□ -1.39
VPS55P47111 LAS17YOR181W 1902 nt6.35□□□□□ -1.39
VPS55P47111 YER152W-AYER152W-A 567 nt6.34□□□□□ -1.39
VPS55P47111 CAK1YFL029C 1107 nt6.34□□□□□ -1.39
VPS55P47111 MRS4YKR052C 915 nt6.34□□□□□ -1.39
VPS55P47111 OCH1YGL038C 1443 nt6.33□□□□□ -1.4
VPS55P47111 BUB2YMR055C 921 nt6.32□□□□□ -1.4
VPS55P47111 NPP2YEL016C 1482 nt6.32□□□□□ -1.4
VPS55P47111 PDC6YGR087C 1692 nt6.32□□□□□ -1.4
VPS55P47111 YJR149WYJR149W 1215 nt6.31□□□□□ -1.4
VPS55P47111 EMC3YKL207W 762 nt6.31□□□□□ -1.4
VPS55P47111 YMR210WYMR210W 1350 nt6.31□□□□□ -1.4
VPS55P47111 YJL009WYJL009W 327 nt6.3□□□□□ -1.4
VPS55P47111 MFT1YML062C 1179 nt6.29□□□□□ -1.4
VPS55P47111 RNA170RNA170 169 nt6.29□□□□□ -1.4
VPS55P47111 GRH1YDR517W 1119 nt6.28□□□□□ -1.4
VPS55P47111 YER156CYER156C 1017 nt6.28□□□□□ -1.4
VPS55P47111 PET18YCR020C 648 nt6.27□□□□□ -1.41
VPS55P47111 NSG2YNL156C 900 nt6.27□□□□□ -1.41
VPS55P47111 ORT1YOR130C 879 nt6.27□□□□□ -1.41
VPS55P47111 AAT1YKL106W 1356 nt6.27□□□□□ -1.41
VPS55P47111 YPR084WYPR084W 1371 nt6.27□□□□□ -1.41
VPS55P47111 PMA2YPL036W 2844 nt6.26□□□□□ -1.41
VPS55P47111 ADE16YLR028C 1776 nt6.26□□□□□ -1.41
VPS55P47111 YBR056WYBR056W 1506 nt6.26□□□□□ -1.41
VPS55P47111 YPT31YER031C 672 nt6.26□□□□□ -1.41
VPS55P47111 HRA1HRA1 564 nt6.26□□□□□ -1.41
VPS55P47111 THI6YPL214C 1623 nt6.25□□□□□ -1.41
VPS55P47111 ADE5,7YGL234W 2409 nt6.25□□□□□ -1.41
VPS55P47111 MRP1YDR347W 966 nt6.25□□□□□ -1.41
VPS55P47111 BUD20YLR074C 501 nt6.25□□□□□ -1.41
VPS55P47111 PAU21YOR394W 495 nt6.25□□□□□ -1.41
VPS55P47111 PAU22YPL282C 495 nt6.25□□□□□ -1.41
VPS55P47111 YMR206WYMR206W 942 nt6.24□□□□□ -1.41
VPS55P47111 YOR343CYOR343C 327 nt6.24□□□□□ -1.41
VPS55P47111 RHO1YPR165W 630 nt6.24□□□□□ -1.41
VPS55P47111 snR4snR4 186 nt6.24□□□□□ -1.41
VPS55P47111 snR86snR86 1004 nt6.23□□□□□ -1.41
VPS55P47111 BXI1YNL305C 894 nt6.23□□□□□ -1.41
VPS55P47111 ADA2YDR448W 1305 nt6.23□□□□□ -1.41
VPS55P47111 FRT1YOR324C 1809 nt6.22□□□□□ -1.41
VPS55P47111 GDH1YOR375C 1365 nt6.22□□□□□ -1.41
VPS55P47111 RTG2YGL252C 1767 nt6.22□□□□□ -1.41
VPS55P47111 RPS6AYPL090C 711 nt6.22□□□□□ -1.41
VPS55P47111 RPS6BYBR181C 711 nt6.22□□□□□ -1.41
VPS55P47111 PFS2YNL317W 1398 nt6.21□□□□□ -1.41
VPS55P47111 UTR5YEL035C 501 nt6.21□□□□□ -1.42
VPS55P47111 PUP3YER094C 618 nt6.21□□□□□ -1.42
VPS55P47111 AIM34YMR003W 597 nt6.21□□□□□ -1.42
VPS55P47111 THI73YLR004C 1572 nt6.2□□□□□ -1.42
VPS55P47111 TAD2YJL035C 753 nt6.2□□□□□ -1.42
VPS55P47111 YLR173WYLR173W 1827 nt6.2□□□□□ -1.42
VPS55P47111 ATP2YJR121W 1536 nt6.2□□□□□ -1.42
VPS55P47111 PMU1YKL128C 888 nt6.19□□□□□ -1.42
VPS55P47111 MEP1YGR121C 1479 nt6.19□□□□□ -1.42
VPS55P47111 HXT11YOL156W 1704 nt6.19□□□□□ -1.42
VPS55P47111 YRF1-1YDR545W 5391 nt6.19□□□□□ -1.42
VPS55P47111 YRF1-5YLR467W 5391 nt6.19□□□□□ -1.42
VPS55P47111 YRF1-8YOR396W 5391 nt6.19□□□□□ -1.42
VPS55P47111 YAL016C-AYAL016C-A 315 nt6.18□□□□□ -1.42
VPS55P47111 ECM10YEL030W 1935 nt6.18□□□□□ -1.42
VPS55P47111 GCD11YER025W 1584 nt6.18□□□□□ -1.42
VPS55P47111 TRP2YER090W 1524 nt6.17□□□□□ -1.42
VPS55P47111 RPL12BYDR418W 498 nt6.17□□□□□ -1.42
VPS55P47111 HSV2YGR223C 1347 nt6.17□□□□□ -1.42
VPS55P47111 ELP4YPL101W 1371 nt6.17□□□□□ -1.42
VPS55P47111 EHT1YBR177C 1356 nt6.17□□□□□ -1.42
VPS55P47111 TOP3YLR234W 1971 nt6.17□□□□□ -1.42
VPS55P47111 TDH1YJL052W 999 nt6.16□□□□□ -1.42
VPS55P47111 RCF1YML030W 480 nt6.16□□□□□ -1.42
VPS55P47111 PRE10YOR362C 867 nt6.16□□□□□ -1.42
VPS55P47111 ITR1YDR497C 1755 nt6.16□□□□□ -1.42
VPS55P47111 SHC1YER096W 1539 nt6.15□□□□□ -1.42
VPS55P47111 GGC1YDL198C 903 nt6.15□□□□□ -1.42
VPS55P47111 YHL030W-AYHL030W-A 462 nt6.15□□□□□ -1.42
VPS55P47111 TIM50YPL063W 1431 nt6.15□□□□□ -1.43
VPS55P47111 LRO1YNR008W 1986 nt6.15□□□□□ -1.43
VPS55P47111 YLR072WYLR072W 2082 nt6.14□□□□□ -1.43
VPS55P47111 NDE2YDL085W 1638 nt6.14□□□□□ -1.43
VPS55P47111 NDE1YMR145C 1683 nt6.14□□□□□ -1.43
VPS55P47111 SRM1YGL097W 1449 nt6.14□□□□□ -1.43
VPS55P47111 AFG2YLR397C 2343 nt6.13□□□□□ -1.43
VPS55P47111 BUD31YCR063W 474 nt6.13□□□□□ -1.43
VPS55P47111 tL(UAA)B1tL(UAA)B1 84 nt6.13□□□□□ -1.43
VPS55P47111 tL(UAA)B2tL(UAA)B2 84 nt6.13□□□□□ -1.43
VPS55P47111 tL(UAA)DtL(UAA)D 84 nt6.13□□□□□ -1.43
Retrieved 100 of 7,029 protein–RNA pairs in 15.2 ms