Protein–RNA interactions for Protein: P39702

VPS8, Vacuolar protein sorting-associated protein 8, yeastyeast

Predictions only

Length 1,274 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS8P39702 tL(UAA)KtL(UAA)K 84 nt9.16□□□□□ -0.94
VPS8P39702 tL(UAA)LtL(UAA)L 84 nt9.16□□□□□ -0.94
VPS8P39702 tL(UAA)NtL(UAA)N 84 nt9.16□□□□□ -0.94
VPS8P39702 BXI1YNL305C 894 nt9.16□□□□□ -0.94
VPS8P39702 ILV2YMR108W 2064 nt9.16□□□□□ -0.94
VPS8P39702 YRF1-2YER190W 5046 nt9.15□□□□□ -0.94
VPS8P39702 YPR084WYPR084W 1371 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)BtD(GUC)B 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)DtD(GUC)D 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)G1tD(GUC)G1 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)G2tD(GUC)G2 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)I1tD(GUC)I1 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)I2tD(GUC)I2 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)J1tD(GUC)J1 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)J2tD(GUC)J2 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)J3tD(GUC)J3 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)J4tD(GUC)J4 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)KtD(GUC)K 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)L1tD(GUC)L1 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)L2tD(GUC)L2 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)MtD(GUC)M 72 nt9.15□□□□□ -0.94
VPS8P39702 tD(GUC)OtD(GUC)O 72 nt9.15□□□□□ -0.94
VPS8P39702 YJR149WYJR149W 1215 nt9.15□□□□□ -0.94
VPS8P39702 RPS6AYPL090C 711 nt9.15□□□□□ -0.94
VPS8P39702 AAC3YBR085W 924 nt9.15□□□□□ -0.94
VPS8P39702 RPS6BYBR181C 711 nt9.15□□□□□ -0.94
VPS8P39702 ELP4YPL101W 1371 nt9.14□□□□□ -0.95
VPS8P39702 MIM1YOL026C 342 nt9.14□□□□□ -0.95
VPS8P39702 YOR268CYOR268C 399 nt9.14□□□□□ -0.95
VPS8P39702 TMS1YDR105C 1422 nt9.14□□□□□ -0.95
VPS8P39702 YDR306CYDR306C 1437 nt9.14□□□□□ -0.95
VPS8P39702 tE(CUC)DtE(CUC)D 72 nt9.13□□□□□ -0.95
VPS8P39702 tE(CUC)ItE(CUC)I 72 nt9.13□□□□□ -0.95
VPS8P39702 EDC2YER035W 438 nt9.13□□□□□ -0.95
VPS8P39702 RFC1YOR217W 2586 nt9.13□□□□□ -0.95
VPS8P39702 YBL095WYBL095W 813 nt9.12□□□□□ -0.95
VPS8P39702 NME1NME1 340 nt9.12□□□□□ -0.95
VPS8P39702 NPP2YEL016C 1482 nt9.12□□□□□ -0.95
VPS8P39702 YPT31YER031C 672 nt9.1□□□□□ -0.95
VPS8P39702 YMR206WYMR206W 942 nt9.1□□□□□ -0.95
VPS8P39702 ATP2YJR121W 1536 nt9.1□□□□□ -0.95
VPS8P39702 BUB2YMR055C 921 nt9.09□□□□□ -0.95
VPS8P39702 YMC2YBR104W 990 nt9.08□□□□□ -0.96
VPS8P39702 TDH1YJL052W 999 nt9.07□□□□□ -0.96
VPS8P39702 MRS4YKR052C 915 nt9.07□□□□□ -0.96
VPS8P39702 RHO1YPR165W 630 nt9.07□□□□□ -0.96
VPS8P39702 KAE1YKR038C 1161 nt9.06□□□□□ -0.96
VPS8P39702 ADE1YAR015W 921 nt9.06□□□□□ -0.96
VPS8P39702 FET5YFL041W 1869 nt9.06□□□□□ -0.96
VPS8P39702 PUS7YOR243C 2031 nt9.05□□□□□ -0.96
VPS8P39702 MDL2YPL270W 2322 nt9.05□□□□□ -0.96
VPS8P39702 YJR154WYJR154W 1041 nt9.05□□□□□ -0.96
VPS8P39702 TOS1YBR162C 1368 nt9.04□□□□□ -0.96
VPS8P39702 YBR056WYBR056W 1506 nt9.04□□□□□ -0.96
VPS8P39702 YJL009WYJL009W 327 nt9.03□□□□□ -0.96
VPS8P39702 TRP2YER090W 1524 nt9.03□□□□□ -0.96
VPS8P39702 THI73YLR004C 1572 nt9.02□□□□□ -0.97
VPS8P39702 TPN1YGL186C 1740 nt9.02□□□□□ -0.97
VPS8P39702 MFG1YDL233W 1377 nt9.01□□□□□ -0.97
VPS8P39702 PUP3YER094C 618 nt9.01□□□□□ -0.97
VPS8P39702 YJL043WYJL043W 774 nt9.01□□□□□ -0.97
VPS8P39702 NUP53YMR153W 1428 nt9.01□□□□□ -0.97
VPS8P39702 FUS3YBL016W 1062 nt9□□□□□ -0.97
VPS8P39702 MTO1YGL236C 2010 nt9□□□□□ -0.97
VPS8P39702 YIL168WYIL168W 384 nt8.99□□□□□ -0.97
VPS8P39702 HBS1YKR084C 1836 nt8.98□□□□□ -0.97
VPS8P39702 SHC1YER096W 1539 nt8.98□□□□□ -0.97
VPS8P39702 THI6YPL214C 1623 nt8.98□□□□□ -0.97
VPS8P39702 YRF1-3YGR296W 5580 nt8.97□□□□□ -0.97
VPS8P39702 YRF1-6YNL339C 5580 nt8.97□□□□□ -0.97
VPS8P39702 YRF1-7YPL283C 5580 nt8.97□□□□□ -0.97
VPS8P39702 PET494YNR045W 1470 nt8.96□□□□□ -0.97
VPS8P39702 PMU1YKL128C 888 nt8.96□□□□□ -0.98
VPS8P39702 AAT1YKL106W 1356 nt8.96□□□□□ -0.98
VPS8P39702 TIM50YPL063W 1431 nt8.95□□□□□ -0.98
VPS8P39702 snR86snR86 1004 nt8.94□□□□□ -0.98
VPS8P39702 GTB1YDR221W 2109 nt8.94□□□□□ -0.98
VPS8P39702 ORT1YOR130C 879 nt8.94□□□□□ -0.98
VPS8P39702 snR4snR4 186 nt8.94□□□□□ -0.98
VPS8P39702 JHD1YER051W 1479 nt8.94□□□□□ -0.98
VPS8P39702 MEP1YGR121C 1479 nt8.94□□□□□ -0.98
VPS8P39702 UFD1YGR048W 1086 nt8.93□□□□□ -0.98
VPS8P39702 EHT1YBR177C 1356 nt8.92□□□□□ -0.98
VPS8P39702 PRE10YOR362C 867 nt8.92□□□□□ -0.98
VPS8P39702 HXT11YOL156W 1704 nt8.91□□□□□ -0.98
VPS8P39702 DUR3YHL016C 2208 nt8.9□□□□□ -0.98
VPS8P39702 LRO1YNR008W 1986 nt8.9□□□□□ -0.98
VPS8P39702 BAP3YDR046C 1815 nt8.9□□□□□ -0.98
VPS8P39702 YHL030W-AYHL030W-A 462 nt8.9□□□□□ -0.98
VPS8P39702 GNP1YDR508C 1992 nt8.9□□□□□ -0.99
VPS8P39702 PSP2YML017W 1782 nt8.89□□□□□ -0.99
VPS8P39702 HXT8YJL214W 1710 nt8.89□□□□□ -0.99
VPS8P39702 YDR476CYDR476C 675 nt8.89□□□□□ -0.99
VPS8P39702 SRM1YGL097W 1449 nt8.88□□□□□ -0.99
VPS8P39702 PRE5YMR314W 705 nt8.87□□□□□ -0.99
VPS8P39702 FIT1YDR534C 1587 nt8.86□□□□□ -0.99
VPS8P39702 RRT6YGL146C 936 nt8.86□□□□□ -0.99
VPS8P39702 RCF1YML030W 480 nt8.86□□□□□ -0.99
VPS8P39702 HOG1YLR113W 1308 nt8.85□□□□□ -0.99
VPS8P39702 DUS3YLR401C 2007 nt8.85□□□□□ -0.99
Retrieved 100 of 7,029 protein–RNA pairs in 33.6 ms