Protein–RNA interactions for Protein: P35732

DEF1, RNA polymerase II degradation factor 1, yeastyeast

Known RBP Predictions only

Length 738 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
DEF1P35732 TGL5YOR081C 2250 nt8.51□□□□□ -1.05
DEF1P35732 FTH1YBR207W 1398 nt8.51□□□□□ -1.05
DEF1P35732 NIF3YGL221C 867 nt8.51□□□□□ -1.05
DEF1P35732 SPS100YHR139C 981 nt8.51□□□□□ -1.05
DEF1P35732 PPS1YBR276C 2424 nt8.51□□□□□ -1.05
DEF1P35732 ERG13YML126C 1476 nt8.51□□□□□ -1.05
DEF1P35732 YFR036W-AYFR036W-A 651 nt8.5□□□□□ -1.05
DEF1P35732 VBA5YKR105C 1749 nt8.5□□□□□ -1.05
DEF1P35732 YLL058WYLL058W 1728 nt8.5□□□□□ -1.05
DEF1P35732 YOR389WYOR389W 1875 nt8.5□□□□□ -1.05
DEF1P35732 RIM2YBR192W 1134 nt8.5□□□□□ -1.05
DEF1P35732 NPP2YEL016C 1482 nt8.5□□□□□ -1.05
DEF1P35732 PAR32YDL173W 888 nt8.49□□□□□ -1.05
DEF1P35732 APS2YJR058C 444 nt8.49□□□□□ -1.05
DEF1P35732 MET8YBR213W 825 nt8.49□□□□□ -1.05
DEF1P35732 PDC6YGR087C 1692 nt8.49□□□□□ -1.05
DEF1P35732 PAM17YKR065C 594 nt8.48□□□□□ -1.05
DEF1P35732 ADE8YDR408C 645 nt8.47□□□□□ -1.05
DEF1P35732 AIM1YAL046C 357 nt8.47□□□□□ -1.05
DEF1P35732 TVP23YDR084C 600 nt8.46□□□□□ -1.06
DEF1P35732 YJL064WYJL064W 396 nt8.46□□□□□ -1.06
DEF1P35732 ENT4YLL038C 744 nt8.46□□□□□ -1.06
DEF1P35732 ECM30YLR436C 3825 nt8.46□□□□□ -1.06
DEF1P35732 PUP1YOR157C 786 nt8.46□□□□□ -1.06
DEF1P35732 REG2YBR050C 1017 nt8.45□□□□□ -1.06
DEF1P35732 LEU4YNL104C 1860 nt8.45□□□□□ -1.06
DEF1P35732 YJR114WYJR114W 393 nt8.44□□□□□ -1.06
DEF1P35732 SAC7YDR389W 1965 nt8.44□□□□□ -1.06
DEF1P35732 QCR6YFR033C 444 nt8.43□□□□□ -1.06
DEF1P35732 PAU19YMR325W 375 nt8.43□□□□□ -1.06
DEF1P35732 YEL034C-AYEL034C-A 603 nt8.42□□□□□ -1.06
DEF1P35732 OPI3YJR073C 621 nt8.42□□□□□ -1.06
DEF1P35732 BNA3YJL060W 1335 nt8.42□□□□□ -1.06
DEF1P35732 YHR131CYHR131C 2553 nt8.42□□□□□ -1.06
DEF1P35732 BIM1YER016W 1035 nt8.41□□□□□ -1.06
DEF1P35732 ABZ2YMR289W 1125 nt8.41□□□□□ -1.06
DEF1P35732 AAC3YBR085W 924 nt8.4□□□□□ -1.06
DEF1P35732 CDD1YLR245C 429 nt8.38□□□□□ -1.07
DEF1P35732 RPC31YNL151C 756 nt8.38□□□□□ -1.07
DEF1P35732 DLD3YEL071W 1491 nt8.38□□□□□ -1.07
DEF1P35732 DPL1YDR294C 1770 nt8.38□□□□□ -1.07
DEF1P35732 KRR1YCL059C 951 nt8.37□□□□□ -1.07
DEF1P35732 YLR046CYLR046C 813 nt8.37□□□□□ -1.07
DEF1P35732 GPA1YHR005C 1419 nt8.37□□□□□ -1.07
DEF1P35732 RGT2YDL138W 2292 nt8.36□□□□□ -1.07
DEF1P35732 YER137CYER137C 447 nt8.36□□□□□ -1.07
DEF1P35732 IGD1YFR017C 588 nt8.36□□□□□ -1.07
DEF1P35732 YGR068W-AYGR068W-A 96 nt8.35□□□□□ -1.07
DEF1P35732 DPH5YLR172C 903 nt8.35□□□□□ -1.07
DEF1P35732 YMR210WYMR210W 1350 nt8.35□□□□□ -1.07
DEF1P35732 NAS2YIL007C 663 nt8.34□□□□□ -1.07
DEF1P35732 YNR064CYNR064C 873 nt8.34□□□□□ -1.07
DEF1P35732 PRB1YEL060C 1908 nt8.34□□□□□ -1.07
DEF1P35732 EMC3YKL207W 762 nt8.33□□□□□ -1.08
DEF1P35732 EMP65YER140W 1671 nt8.33□□□□□ -1.08
DEF1P35732 TPK1YJL164C 1194 nt8.32□□□□□ -1.08
DEF1P35732 YOR041CYOR041C 432 nt8.32□□□□□ -1.08
DEF1P35732 UBP13YBL067C 2244 nt8.31□□□□□ -1.08
DEF1P35732 THP3YPR045C 1413 nt8.31□□□□□ -1.08
DEF1P35732 RRT6YGL146C 936 nt8.31□□□□□ -1.08
DEF1P35732 MEU1YLR017W 1014 nt8.31□□□□□ -1.08
DEF1P35732 LRO1YNR008W 1986 nt8.31□□□□□ -1.08
DEF1P35732 AIM3YBR108W 2844 nt8.3□□□□□ -1.08
DEF1P35732 AMF1YOR378W 1548 nt8.3□□□□□ -1.08
DEF1P35732 HMS2YJR147W 1077 nt8.3□□□□□ -1.08
DEF1P35732 FSH2YMR222C 672 nt8.3□□□□□ -1.08
DEF1P35732 FRE5YOR384W 2085 nt8.3□□□□□ -1.08
DEF1P35732 ITR2YOL103W 1830 nt8.29□□□□□ -1.08
DEF1P35732 ERP2YAL007C 648 nt8.29□□□□□ -1.08
DEF1P35732 HAL5YJL165C 2568 nt8.28□□□□□ -1.08
DEF1P35732 tE(CUC)DtE(CUC)D 72 nt8.28□□□□□ -1.08
DEF1P35732 tE(CUC)ItE(CUC)I 72 nt8.28□□□□□ -1.08
DEF1P35732 VMA11YPL234C 495 nt8.28□□□□□ -1.08
DEF1P35732 KRE1YNL322C 942 nt8.27□□□□□ -1.09
DEF1P35732 SLG1YOR008C 1137 nt8.27□□□□□ -1.09
DEF1P35732 TIP1YBR067C 633 nt8.27□□□□□ -1.09
DEF1P35732 KEL3YPL263C 1956 nt8.27□□□□□ -1.09
DEF1P35732 ENO2YHR174W 1314 nt8.27□□□□□ -1.09
DEF1P35732 SKY1YMR216C 2229 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)DtA(AGC)D 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)FtA(AGC)F 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)GtA(AGC)G 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)HtA(AGC)H 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)JtA(AGC)J 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)K1tA(AGC)K1 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)K2tA(AGC)K2 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)LtA(AGC)L 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)M1tA(AGC)M1 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)M2tA(AGC)M2 73 nt8.26□□□□□ -1.09
DEF1P35732 tA(AGC)PtA(AGC)P 73 nt8.26□□□□□ -1.09
DEF1P35732 YEL009C-AYEL009C-A 408 nt8.26□□□□□ -1.09
DEF1P35732 ELO1YJL196C 933 nt8.26□□□□□ -1.09
DEF1P35732 SWT21YNL187W 1074 nt8.26□□□□□ -1.09
DEF1P35732 VMA2YBR127C 1554 nt8.26□□□□□ -1.09
DEF1P35732 TPC1YGR096W 945 nt8.25□□□□□ -1.09
DEF1P35732 SPE2YOL052C 1191 nt8.25□□□□□ -1.09
DEF1P35732 IPL1YPL209C 1104 nt8.25□□□□□ -1.09
DEF1P35732 PPZ2YDR436W 2133 nt8.24□□□□□ -1.09
DEF1P35732 YDR467CYDR467C 327 nt8.24□□□□□ -1.09
DEF1P35732 SUV3YPL029W 2214 nt8.23□□□□□ -1.09
Retrieved 100 of 7,029 protein–RNA pairs in 11.5 ms