Protein–RNA interactions for Protein: P23643

VPS3, Vacuolar protein sorting-associated protein 3, yeastyeast

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS3P23643 GPM1YKL152C 744 nt8.45□□□□□ -1.06
VPS3P23643 PDC6YGR087C 1692 nt8.45□□□□□ -1.06
VPS3P23643 MEX67YPL169C 1800 nt8.45□□□□□ -1.06
VPS3P23643 AGP3YFL055W 1677 nt8.44□□□□□ -1.06
VPS3P23643 TOM71YHR117W 1920 nt8.43□□□□□ -1.06
VPS3P23643 GNP1YDR508C 1992 nt8.43□□□□□ -1.06
VPS3P23643 UTR5YEL035C 501 nt8.43□□□□□ -1.06
VPS3P23643 EDC2YER035W 438 nt8.43□□□□□ -1.06
VPS3P23643 tL(UAA)B1tL(UAA)B1 84 nt8.43□□□□□ -1.06
VPS3P23643 tL(UAA)B2tL(UAA)B2 84 nt8.43□□□□□ -1.06
VPS3P23643 tL(UAA)DtL(UAA)D 84 nt8.43□□□□□ -1.06
VPS3P23643 SUP51tL(UAA)J 84 nt8.43□□□□□ -1.06
VPS3P23643 tL(UAA)KtL(UAA)K 84 nt8.43□□□□□ -1.06
VPS3P23643 tL(UAA)LtL(UAA)L 84 nt8.43□□□□□ -1.06
VPS3P23643 tL(UAA)NtL(UAA)N 84 nt8.43□□□□□ -1.06
VPS3P23643 YLR173WYLR173W 1827 nt8.42□□□□□ -1.06
VPS3P23643 YDR467CYDR467C 327 nt8.41□□□□□ -1.06
VPS3P23643 YMR206WYMR206W 942 nt8.41□□□□□ -1.06
VPS3P23643 ELP4YPL101W 1371 nt8.4□□□□□ -1.06
VPS3P23643 YPT31YER031C 672 nt8.4□□□□□ -1.06
VPS3P23643 BXI1YNL305C 894 nt8.4□□□□□ -1.06
VPS3P23643 RPS6AYPL090C 711 nt8.4□□□□□ -1.06
VPS3P23643 RPS6BYBR181C 711 nt8.4□□□□□ -1.06
VPS3P23643 MDL2YPL270W 2322 nt8.4□□□□□ -1.07
VPS3P23643 TMS1YDR105C 1422 nt8.39□□□□□ -1.07
VPS3P23643 RNA170RNA170 169 nt8.39□□□□□ -1.07
VPS3P23643 LEU4YNL104C 1860 nt8.38□□□□□ -1.07
VPS3P23643 YDR306CYDR306C 1437 nt8.38□□□□□ -1.07
VPS3P23643 TPN1YGL186C 1740 nt8.38□□□□□ -1.07
VPS3P23643 YJR149WYJR149W 1215 nt8.38□□□□□ -1.07
VPS3P23643 AAC3YBR085W 924 nt8.38□□□□□ -1.07
VPS3P23643 INH1YDL181W 258 nt8.37□□□□□ -1.07
VPS3P23643 TDH1YJL052W 999 nt8.37□□□□□ -1.07
VPS3P23643 ATP2YJR121W 1536 nt8.37□□□□□ -1.07
VPS3P23643 BUB2YMR055C 921 nt8.36□□□□□ -1.07
VPS3P23643 YBL095WYBL095W 813 nt8.36□□□□□ -1.07
VPS3P23643 MFG1YDL233W 1377 nt8.35□□□□□ -1.07
VPS3P23643 tE(CUC)DtE(CUC)D 72 nt8.34□□□□□ -1.07
VPS3P23643 tE(CUC)ItE(CUC)I 72 nt8.34□□□□□ -1.07
VPS3P23643 ADE1YAR015W 921 nt8.34□□□□□ -1.07
VPS3P23643 YMC2YBR104W 990 nt8.34□□□□□ -1.07
VPS3P23643 YIL177CYIL177C 5277 nt8.34□□□□□ -1.07
VPS3P23643 TOS1YBR162C 1368 nt8.34□□□□□ -1.07
VPS3P23643 KAE1YKR038C 1161 nt8.33□□□□□ -1.08
VPS3P23643 MRS4YKR052C 915 nt8.33□□□□□ -1.08
VPS3P23643 MIM1YOL026C 342 nt8.33□□□□□ -1.08
VPS3P23643 RHO1YPR165W 630 nt8.33□□□□□ -1.08
VPS3P23643 FUS3YBL016W 1062 nt8.32□□□□□ -1.08
VPS3P23643 NUP53YMR153W 1428 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)BtD(GUC)B 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)DtD(GUC)D 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)G1tD(GUC)G1 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)G2tD(GUC)G2 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)I1tD(GUC)I1 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)I2tD(GUC)I2 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)J1tD(GUC)J1 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)J2tD(GUC)J2 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)J3tD(GUC)J3 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)J4tD(GUC)J4 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)KtD(GUC)K 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)L1tD(GUC)L1 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)L2tD(GUC)L2 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)MtD(GUC)M 72 nt8.31□□□□□ -1.08
VPS3P23643 tD(GUC)OtD(GUC)O 72 nt8.31□□□□□ -1.08
VPS3P23643 YJL043WYJL043W 774 nt8.31□□□□□ -1.08
VPS3P23643 YJL009WYJL009W 327 nt8.3□□□□□ -1.08
VPS3P23643 RTG2YGL252C 1767 nt8.3□□□□□ -1.08
VPS3P23643 PMU1YKL128C 888 nt8.29□□□□□ -1.08
VPS3P23643 THI73YLR004C 1572 nt8.28□□□□□ -1.08
VPS3P23643 PUP3YER094C 618 nt8.28□□□□□ -1.08
VPS3P23643 PET494YNR045W 1470 nt8.27□□□□□ -1.09
VPS3P23643 YBR056WYBR056W 1506 nt8.26□□□□□ -1.09
VPS3P23643 HBS1YKR084C 1836 nt8.25□□□□□ -1.09
VPS3P23643 YIL168WYIL168W 384 nt8.25□□□□□ -1.09
VPS3P23643 YDR476CYDR476C 675 nt8.24□□□□□ -1.09
VPS3P23643 LPD1YFL018C 1500 nt8.24□□□□□ -1.09
VPS3P23643 UFD1YGR048W 1086 nt8.23□□□□□ -1.09
VPS3P23643 PRE10YOR362C 867 nt8.23□□□□□ -1.09
VPS3P23643 BAP3YDR046C 1815 nt8.22□□□□□ -1.09
VPS3P23643 THI6YPL214C 1623 nt8.22□□□□□ -1.09
VPS3P23643 TIM50YPL063W 1431 nt8.22□□□□□ -1.09
VPS3P23643 NPP2YEL016C 1482 nt8.22□□□□□ -1.09
VPS3P23643 PRE5YMR314W 705 nt8.22□□□□□ -1.09
VPS3P23643 HOG1YLR113W 1308 nt8.22□□□□□ -1.09
VPS3P23643 ALR1YOL130W 2580 nt8.21□□□□□ -1.09
VPS3P23643 FET5YFL041W 1869 nt8.21□□□□□ -1.09
VPS3P23643 FIT1YDR534C 1587 nt8.21□□□□□ -1.1
VPS3P23643 SHC1YER096W 1539 nt8.2□□□□□ -1.1
VPS3P23643 PSP2YML017W 1782 nt8.2□□□□□ -1.1
VPS3P23643 JHD1YER051W 1479 nt8.19□□□□□ -1.1
VPS3P23643 AAT1YKL106W 1356 nt8.19□□□□□ -1.1
VPS3P23643 YHL030W-AYHL030W-A 462 nt8.18□□□□□ -1.1
VPS3P23643 SDH8YBR269C 417 nt8.18□□□□□ -1.1
VPS3P23643 SNU66YOR308C 1764 nt8.17□□□□□ -1.1
VPS3P23643 snR86snR86 1004 nt8.17□□□□□ -1.1
VPS3P23643 EHT1YBR177C 1356 nt8.17□□□□□ -1.1
VPS3P23643 GCD11YER025W 1584 nt8.17□□□□□ -1.1
VPS3P23643 DUR3YHL016C 2208 nt8.16□□□□□ -1.1
VPS3P23643 RCF1YML030W 480 nt8.16□□□□□ -1.1
VPS3P23643 ADE2YOR128C 1716 nt8.16□□□□□ -1.1
Retrieved 100 of 7,029 protein–RNA pairs in 20.6 ms